| Protein: | SPBP8B7.20c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 608 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBP8B7.20c.
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..2] | [606..16] |
|
|
287.0 | [0..1] | [606..1] |
|
|
285.0 | [0..197] | [607..58] |
|
|
283.0 | [0..87] | [606..119] |
|
|
283.0 | [0..1] | [605..3] |
|
|
282.0 | [0..2] | [607..44] |
|
|
281.0 | [0..77] | [580..141] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MGRKQKSKQG IPPTLEENHN SSHKVTENAK KRKHSKEKPQ NSRKRQLAEE KKSLFENSDS 60
61 ENEKDLIDAD EFEEAETLSD LEHDEEPQTF ADEFIDDEAK ECEGEEEDSV FDSDEEHEVK 120
121 PMFSDDSGDE EDLELANMEA MSRKL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [146-545] |
1 11 21 31 41 51
| | | | | |
1 DEEAELEEKE AEEELHTNIH PEAPTVLPPI DGFTDSQPIS TLPQDLSQIQ LRIQEIVRVL 60
61 NDFKNLCEPG RNRSEYVDQL LNDICAYYGY SRFLAEKLFE LFSVSEAVEF FEANEMPRPV 120
121 TIRTNTLKTQ RRELAQALIN RGVNLEPIGK WSKVGLQVFE SQVPIGATPE YLAGHYILQA 180
181 ASSFLPVMAL APQPNERILD MSSAPGGKVT YVAALQKNTG IIFANDSNKA RTKALSANIH 240
241 RLGVRNAIVC NYDGRKFPNE VIGGFDRVLL DAPCSGTGVI YKDQSVKTNK SERDFDTLSH 300
301 LQRQLLLSAI DSVNADSKTG GFIVYSTCSI TVDEDEAVIQ YALKKRPNVK LVSTGLEFGR 360
361 EGFTRFREKR FHPSLKLTRR YYPHVHNIDG FFVAKLKKIS
|
| Detection Method: | |
| Confidence: | 55.0 |
| Match: | 1sqfA |
| Description: | The crystal structure of E. coli Fmu binary complex with S-Adenosylmethionine at 2.1 A resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| methyltransferase activity | 4.15445027778357 | bayes_pls_golite062009 |
| rRNA methyltransferase activity | 4.09362182773099 | bayes_pls_golite062009 |
| N-methyltransferase activity | 4.07806017452628 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 4.07153733729662 | bayes_pls_golite062009 |
| protein methyltransferase activity | 3.92746815303714 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.39429041855776 | bayes_pls_golite062009 |
| RNA methyltransferase activity | 3.07428840534971 | bayes_pls_golite062009 |
| histone methyltransferase activity | 2.99461585647365 | bayes_pls_golite062009 |
| DNA-methyltransferase activity | 2.43145108778901 | bayes_pls_golite062009 |
| protein-arginine N-methyltransferase activity | 2.41876112831625 | bayes_pls_golite062009 |
| arginine N-methyltransferase activity | 2.41876112831625 | bayes_pls_golite062009 |
| transferase activity | 2.22303238506686 | bayes_pls_golite062009 |
| histone-arginine N-methyltransferase activity | 2.04296107639729 | bayes_pls_golite062009 |
| rRNA (guanine) methyltransferase activity | 2.00108769169811 | bayes_pls_golite062009 |
| rRNA (adenine) methyltransferase activity | 1.83964463328968 | bayes_pls_golite062009 |
| tRNA methyltransferase activity | 1.76571145896453 | bayes_pls_golite062009 |
| rRNA (adenine-N6,N6-)-dimethyltransferase activity | 1.75675289134467 | bayes_pls_golite062009 |
| protein-arginine omega-N monomethyltransferase activity | 1.66871163498737 | bayes_pls_golite062009 |
| transcription termination factor activity | 1.58162486937564 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| histone methyltransferase activity (H4-R3 specific) | 1.1103522853299 | bayes_pls_golite062009 |
| transcription regulator activity | 0.914549843668268 | bayes_pls_golite062009 |
| rRNA (uridine-2'-O-)-methyltransferase activity | 0.90544396691236 | bayes_pls_golite062009 |
| protein-arginine omega-N asymmetric methyltransferase activity | 0.89325812193225 | bayes_pls_golite062009 |
| DNA binding | 0.86027591375666 | bayes_pls_golite062009 |
| rRNA (uridine) methyltransferase activity | 0.742142092552002 | bayes_pls_golite062009 |
| site-specific DNA-methyltransferase (adenine-specific) activity | 0.703178429468566 | bayes_pls_golite062009 |
| tRNA (cytosine-5-)-methyltransferase activity | 0.672282175551951 | bayes_pls_golite062009 |
| tRNA (cytosine)-methyltransferase activity | 0.672282175551951 | bayes_pls_golite062009 |
| nucleic acid binding | 0.616949327277483 | bayes_pls_golite062009 |
| RNA binding | 0.417524996559564 | bayes_pls_golite062009 |
| binding | 0.383237930789959 | bayes_pls_golite062009 |
| O-methyltransferase activity | 0.250946859465502 | bayes_pls_golite062009 |
| tRNA (adenine-N1-)-methyltransferase activity | 0.0803947886180681 | bayes_pls_golite062009 |
| tRNA (adenine)-methyltransferase activity | 0.0803947886180681 | bayes_pls_golite062009 |
|
Region A: Residues: [546-608] |
1 11 21 31 41 51
| | | | | |
1 DKIPTVNVAD DMKDGTNNDV EIEKNSTEID NITFNDEADK EIIEQNRRKW LKSKGYKVAK 60
61 KKD
|
| Detection Method: | |
| Confidence: | 62.045757 |
| Match: | 2frxA |
| Description: | No description for 2frxA was found. |
