YRC Public Data Repository - Protein Structure Prediction

Protein:	zas1
Organism:	Schizosaccharomyces pombe
Length:	897 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for zas1.

Description	E-value	Query Range	Subject Range
gi\|6470271 - gi\|6470271\|gb\|AAF13704.1\|AF199437_1 C2H2 zinc finger protein Zas1A [Schizosaccharomyces pombe]	600.0	[0..6]	[897..6]
gi\|85105627 - gi\|85105627\|ref\|XP_962006.1\| hypothetical protein NCU05242 [Neurospora crassa OR74A] gi\|28923597, gi\|... - gi\|32408235\|ref\|XP_324599.1\| hypothetical protein [Neurospora crassa], gi\|28923597\|gb\|EAA32770.1\| co...	471.0	[0..14]	[892..85]
gi\|42553296, gi\|... - gi\|46136509\|ref\|XP_389946.1\| hypothetical protein FG09770.1 [Gibberella zeae PH-1], gi\|42553296\|gb\|E...	468.0	[0..14]	[892..57]
KLF1_SCHPO - Zinc finger protein klf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=klf1 PE=2 SV=1 SPAC1039.05c - conserved fungal protein	467.0	[0..140]	[892..3]
gi\|39952267, gi\|... - gi\|39952267\|ref\|XP_363850.1\| hypothetical protein MG01776.4 [Magnaporthe grisea 70-15], gb\|EAA56125....	466.0	[0..14]	[892..93]
gi\|40739361, gi\|... - gi\|67541126\|ref\|XP_664337.1\| hypothetical protein AN6733.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	465.0	[0..23]	[894..47]
gi\|169766108 - gi\|169766108\|ref\|XP_001817525.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83765380 - gi\|83765380\|dbj\|BAE55523.1\| unnamed protein product [Aspergillus oryzae]	450.0	[0..14]	[894..79]
gi\|109125970 - gi\|109125970\|ref\|XP_001115785.1\| PREDICTED: similar to zinc finger protein 665 [Macaca mulatta]	449.0	[0..2]	[387..326]
ZNF347 - zinc finger protein 347 gi\|208968133 - gi\|208968133\|dbj\|BAG73905.1\| zinc finger protein 347 [synthetic construct]	449.0	[0..2]	[397..405]
gi\|73970462 - gi\|73970462\|ref\|XP_531880.2\| PREDICTED: similar to Zinc finger protein 208 [Canis familiaris]	446.0	[0..3]	[407..335]

Back

Predicted Domain #1

Region A:
Residues: [1-211]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNEESFTEK PLKKRSRAHR LGDPRFYCTY PDCPKSFTRK EHLRRHERTH ENVKAFSCSF  60
   61 CNRAFARSDV LNRHVQQMHL QKQNLSERRM LNASCFLGFC VLAHDYVNLI NARHFMIEHF 120
  121 LSLFAFCRTI LFSLLTSFLL VPPPQFFHSE AGERPTPSVG APSSLASSMD SVRVAPSMLA 180
  181 ASHQIVPQYS ENNPRVSNEP PRVTIENASL K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.39794
Match:	2i13A
Description:	No description for 2i13A was found.

Predicted Domain #2

Region A:
Residues: [212-401]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFSGYIKSHM STSNFLNGEP DLNVNVDLSP FPNLPATVPI TQAASTANAF QQPSNQFQTQ  60
   61 KLPSGLDTRP VSSYPDELTQ LESNPDSFSR LDLQGDCTCI FKNRSSIASS RTMDDVVRWL 120
  121 FSSGKRRQKY ESSYPYQTQS NQIPSQDQYS DTDSNFLSYY FSASGPMYVP QKCPATVYNN 180
  181 LLNFLEGSFH

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [402-633]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQPNFLAMFT LESVSSWLNA YWSMFHVRWP ILHRGTFQIT QAPLDLLLSM ITLGMHSSND  60
   61 LSIRSLAVEI HTTLRYNIYQ KQEFGPPVSL WVYQALFLIQ VFELFTSNLK QHRLAQMFHP 120
  121 VLIEAMRQAI PSDALTVRSE TFGESNTPLT LQQWHKWITR ESVKRIAFFV FALDSTSTLV 180
  181 FGNQPLLYVT DVSMPLLAEE HHWEAENFEV WAAQKPTIEP PTILHMLKAF VQ

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [634-897]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CEQCESPLPK LSPWNMLLLL HGLLSVDISL KQKKFVPGMK LSKREIDGWC SLVFEAYQKW  60
   61 NRCYYSIFLN NNILPFGHPF VKECRSLYNL ACIYSKTRLT YLQAFAKAVT DPVDGSVTSK 120
  121 TVAPLRYVKI WANTENARYS TSNALEILDM LLREKIESAP RYDTLIYHSW CYYVAALVLW 180
  181 SIGFALDEEN KKTEEVTNLH SQMSRYVTKV RQALEQGEPL FAVVEKSKNP IILHVVLQAL 240
  241 DVFPWDLLGE HKKIIQQLLS KGND

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits