| Protein: | SPCC63.03 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 642 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC63.03.
| Description | E-value | Query Range |
Subject Range |
|
|
487.0 | [0..2] | [608..8] |
|
|
487.0 | [0..2] | [608..8] |
|
|
482.0 | [0..3] | [608..9] |
|
|
481.0 | [0..2] | [608..8] |
|
|
480.0 | [0..2] | [608..8] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MDEADSWELY LALGLPKDAT SDQIKESYYR LSRLFHPDRH TADQKAAAEE KFQIIQHAYE 60
61 VLSDPSKKEI YDNFGEQGLK TDWNVGFPGK SAEELKNKIR EQIQERDIHE IDSLV
|
| Detection Method: |  |
| Confidence: | 24.09691 |
| Match: | 1bq0A |
| Description: | J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.823553393353769 | bayes_pls_golite062009 |
| protein binding | 0.40147996507406 | bayes_pls_golite062009 |
|
Region A: Residues: [116-336] |
1 11 21 31 41 51
| | | | | |
1 QSRSETTIVV NMTPLFARNI RVQNALGLGA GTRMLTPYER FSLIQWVSFQ IKSSFSIPTS 60
61 FSNDLKKPSF NSFSSGSFDD EFSAPSDEDE GNHKTSSRLS IVTEASMRQN SKLQPSIFAV 120
121 YHSQPSPNLS SEIGFSLLRP GLITVKSVYA INNQTFIVPL IQISGLKRPP QATVVIGRQI 180
181 TRFGTLTARW KTGVWSLGSW GIASPRGANS SFSLTWQQMK A
|
| Detection Method: | |
| Confidence: | 34.69897 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.922056839584135 | bayes_pls_golite062009 |
| protein binding | 0.37137044680558 | bayes_pls_golite062009 |
|
Region A: Residues: [337-465] |
1 11 21 31 41 51
| | | | | |
1 IPNSLVPQLS WNAEVTAGLM YSGIAYNYNL KNATEDSPYQ IKLGTSMSTV GGLQVSGDTS 60
61 RKVGRYSTFG VNISVGVPTG SITFSLNWSR LGQKISLPIM WCSVFDRSAV FWGLVFPITS 120
121 ILGVEQFFL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.666 | c.51.3 | B12-dependend dehydatases associated subunit |
| View | Download | 0.638 | b.61.1 | Avidin/streptavidin |
| View | Download | 0.649 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.627 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.621 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
|
Region A: Residues: [466-642] |
1 11 21 31 41 51
| | | | | |
1 RPRRLSNQKR LRLLRLQKLK DSQERKKVSA IRAVKLMKEI VEKKQKLEME KGGLVIEYAE 60
61 YRVVNCGANE PDLKQDVTIS IAALVENSRL AIPSSVSKSS IIGIYPLFSD NEKELEIVYT 120
121 FHQQRHRVVL RDKQGVFLPS RGMLSYNHIK HVLTSTRTQN FVLNDTSLLN NHCLHFR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
