| Protein: | syj2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 889 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for syj2.
| Description | E-value | Query Range |
Subject Range |
|
|
912.0 | [0..2] | [887..48] |
|
|
908.0 | [0..1] | [885..1] |
|
|
907.0 | [0..2] | [880..20] |
|
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891.0 | [0..1] | [885..1] |
|
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888.0 | [0..1] | [878..1] |
|
|
868.0 | [0..1] | [882..1] |
|
|
861.0 | [0..2] | [878..8] |
|
Region A: Residues: [1-206] |
1 11 21 31 41 51
| | | | | |
1 MQCYLKRKER SVAFITEKYA AIIQKPSVKD SDCIITFTCI SLEEFEKIKE YELLFGGEKI 60
61 LGTLGLFNYV CEDMKEGVFL CVARKAKLVL RIGNRDPISK LENVSFISLD QELWDEELFE 120
121 PMPRNSSPSS TFSTSTSDLN NIEKDNLVNS EYSSKYSSTT RIYPYHSLSQ LTDLLTDGSF 180
181 YVSTNISCFS RFQSEQPYGP KDIYCW
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [207-354] |
1 11 21 31 41 51
| | | | | |
1 NRFLITELDN HFSEAHILEK FPNLLLHCFR GYVERMFIDS MSMSIISKVS SYGSRQTYPP 60
61 SGIDDSSYCS MFVETEFIVE IAQTVFSFVQ VRGTVPCFWE EQFSSWYGPS ISFLRSSQAS 120
121 QSLFNFHFSK LYKAYGDIYV IDLLQTKG
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.779 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.725 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.683 | c.36.1 | Thiamin diphosphate-binding fold (THDP-binding) |
| View | Download | 0.641 | b.60.1 | Lipocalins |
| View | Download | 0.594 | b.60.1 | Lipocalins |
| View | Download | 0.583 | b.60.1 | Lipocalins |
| View | Download | 0.571 | b.60.1 | Lipocalins |
| View | Download | 0.531 | b.60.1 | Lipocalins |
| View | Download | 0.453 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.364 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.337 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.323 | d.227.1 | OsmC-like |
| View | Download | 0.322 | d.110.4 | SNARE-like |
|
Region A: Residues: [355-458] |
1 11 21 31 41 51
| | | | | |
1 FEASLYEAYK HHLMLLPFPA VVKKFHFTPD PARPDIDPRL ETDLADDLKE MGYTQKSIEN 60
61 DMLESFQKGV FRINDLDCLG RTNVIQYQIS RLVLKDIFFN LQIG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.764 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.744 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.741 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.736 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.684 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.639 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.623 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.603 | N/A | N/A | a.24.18 | Description not found. |
| View | Download | 0.599 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.567 | N/A | N/A | a.158.1 | F-box domain |
| View | Download | 0.468 | N/A | N/A | a.278.1 | Description not found. |
| View | Download | 0.448 | N/A | N/A | c.44.1 | Phosphotyrosine protein phosphatases I |
| View | Download | 0.330 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.297 | N/A | N/A | a.278.1 | Description not found. |
| View | Download | 0.218 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [459-545] |
1 11 21 31 41 51
| | | | | |
1 VTFNILEYLR HLWSNNGDAI AKLITGVGSI GSSATRRGRK SIAGSLSDIS KSFGRMYVGR 60
61 YPDVESQNAI LLLLGCFPNQ SPVLISE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.856 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.851 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.763 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.727 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.726 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.715 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.681 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.677 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.670 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.615 | a.7.8 | GAT domain |
| View | Download | 0.608 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.510 | a.7.8 | GAT domain |
| View | Download | 0.431 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.326 | a.7.8 | GAT domain |
| View | Download | 0.307 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
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Region A: Residues: [546-889] |
1 11 21 31 41 51
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1 SVSSYIQGVL RQRRSEYRVE RDFSIFSSTF NANGKVPSTD EFKRLLLPFG ERTSAYDLYV 60
61 VAVQEIITLN MSHLVSSSNQ KLRIWEEKIL MILNSRDSNN KYMLISSIQM AGVFLGVFIR 120
121 KDDHLVVSKV TKTTRKTGFG GFSANKGAVA IEMNVCDSDF CFVSSHFAPK VNNISERNME 180
181 YTSISDNLVF PSGMKIYDHT NILWMGDFNY RIDSDNEEVR KLVELDDLDK LASYDQLCTE 240
241 MKKGTVFHGL VEPQLTFLPT YKFDNGTNDY DTSDKQRVPS WTDRILATKS FTRNCYKSCD 300
301 IRCSDHRPVF ATFSLKIFST CMDKKAGIIR DARIAYIKSK NSNK
|
| Detection Method: | |
| Confidence: | 113.0 |
| Match: | 1i9yA |
| Description: | Synaptojanin, IPP5C domain |
Matching Structure (courtesy of the PDB): |
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