| Protein: | SPBC30B4.02c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 695 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC30B4.02c.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..37] | [585..1819] |
|
|
323.0 | [0..37] | [558..766] |
|
|
293.0 | [0..37] | [508..817] |
|
|
285.0 | [0..37] | [540..819] |
|
|
282.0 | [0..37] | [558..822] |
|
|
268.0 | [0..37] | [555..762] |
|
|
264.0 | [0..37] | [558..818] |
|
Region A: Residues: [1-455] |
1 11 21 31 41 51
| | | | | |
1 MSNFDDLQIL DQLQTSARFR GDTRIRRFKG SNNSKSPFGL NPSSRISQWP RITFIRAKDN 60
61 YNPAEELCQL IDEQNAHNEA KHQSKEIMLP KETNVKSCED LSKTGEIKAL DIVLFKAITS 120
121 KGDTLKVKKI PEYAEAFDTT KNVEVSSFPE KSMNENVLIQ HSLNLAPSDK EISSTEESEQ 180
181 LCYKEQESEK ELYSKDNDDS LDILNVPNLV NDDIANNNAA PPPPLAQAQE QLSTENEDEF 240
241 DIDDTTDKMT TFTMNKFADL SVLEEDDDDE DEDEELEGEK EEEEEEKEKP EISNYDETEG 300
301 KVNFSLEDSE SLEFDEGSDD YDYAKLTTEL VGNTDSLAED EDDILEEDED EDEEELLAIF 360
361 DASDDSEIEA YLSIGDTLQN DFTIYDYDSE DEEYNNPSTQ KTEKVSQSKK GAKVKEEKGL 420
421 KKDRKLPKKM RKAQKKLERK AGKAVAARMG DAFSN
|
| Detection Method: |  |
| Confidence: | 29.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [456-537] |
1 11 21 31 41 51
| | | | | |
1 SLDDESMNLY AELQEQWLKD KSKKARRRAE REKLRSEGLL GKKSKKKLLR ESQKPSSSDS 60
61 DNASLTRIDK IFINDVYQRM QQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [538-588] |
1 11 21 31 41 51
| | | | | |
1 FKHSAIEEIS LPPCRKYVRR LVHALANDLN LKSRSYGSGN KRYTMLSKTH K
|
| Detection Method: | |
| Confidence: | 2.5 |
| Match: | 1mszA |
| Description: | SmuBP-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.859940889466509 | bayes_pls_golite062009 |
| nucleic acid binding | 0.598402461163598 | bayes_pls_golite062009 |
| DNA binding | 0.545141938793193 | bayes_pls_golite062009 |
| transcription regulator activity | 0.360465698090476 | bayes_pls_golite062009 |
| catalytic activity | 0.307971467423079 | bayes_pls_golite062009 |
| protein binding | 0.0446628977860376 | bayes_pls_golite062009 |
|
Region A: Residues: [589-695] |
1 11 21 31 41 51
| | | | | |
1 FDASSVDLVS LTRIMERLQT RVEYQSFSKS GRKSRMTVSS VRSSKATRVY DGQIVGEDAP 60
61 EISKENPGRR LLEKLGWYAG KGLGHPENEG SKDSLRAIVK VSRSGLG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
