YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC14C8.04
Organism:	Schizosaccharomyces pombe
Length:	289 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC14C8.04.

Description	E-value	Query Range	Subject Range
gi\|1870125 - gi\|1870125\|emb\|CAB06790.1\| unknown [Saccharomyces pastorianus]	299.0	[0..18]	[289..25]
gi\|46123809, gi\|... - gi\|46123809\|ref\|XP_386458.1\| hypothetical protein FG06282.1 [Gibberella zeae PH-1], gi\|42551134\|gb\|E...	295.0	[0..18]	[289..26]
gi\|67528464, gi\|... - gi\|67528464\|ref\|XP_662034.1\| hypothetical protein AN4430.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	294.0	[0..27]	[289..49]
gi\|16565968 - gi\|16565968\|gb\|AAL26320.1\| acetolactate synthase small-subunit precursor-like protein [Magnaporthe g... gi\|38102628, gi\|... - gi\|39973499\|ref\|XP_368140.1\| conserved hypothetical protein [Magnaporthe grisea 70-15], gb\|EAA49446....	292.0	[0..24]	[289..35]
gi\|116204861, gi... - gi\|88176442\|gb\|EAQ83910.1\| conserved hypothetical protein [Chaetomium globosum CBS 148.51], gi\|11620...	292.0	[0..19]	[289..35]
ILV6_YEAST - Acetolactate synthase small subunit, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 /... ILV6 - Regulatory subunit of acetolactate synthase, which catalyzes the first step of branched-chain amino ...	292.0	[0..18]	[289..25]
orf19.12119 - ILV6 CGDID:CAL0003717 Assembly 19, Contig19-20212 (174578, 173670) CDS, reverse complemented, transl... gi\|46444867, gi\|... - gi\|68466183\|ref\|XP_722866.1\| likely valine-responsive mitochondrial acetolacetate synthase regulator...	290.0	[0..19]	[289..23]
gi\|159124981 - gi\|159124981\|gb\|EDP50098.1\| mitochondrial acetolactate synthase small subunit, putative [Aspergillus... gi\|70994656, gi\|... - gi\|70994656\|ref\|XP_752105.1\| mitochondrial acetolactate synthase small subunit [Aspergillus fumigatu...	290.0	[0..27]	[289..49]
gi\|45184803, gi\|... - gi\|45184803\|ref\|NP_982521.1\| AAL021Wp [Ashbya gossypii ATCC 10895], gi\|44980412\|gb\|AAS50345.1\| AAL02... gi\|44980412 - gi\|44980412\|gb\|AAS50345.1\| AAL021Wp [Ashbya gossypii ATCC 10895]	290.0	[0..13]	[289..14]

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Predicted Domain #1

Region A:
Residues: [1-289]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFARRCGRLA NRFVRLKSTS ATSPITYKAL HANSPLPRCR IIEPPRATVP EAVSNIIMST  60
   61 PFNRVQRPKR HVFNCLVQNE PGVLSRLSGI LAARGFNIDS LVVCATEVEN LSRMTIVLRG 120
  121 ADEVVEQAKR QIEDIVSVWA VLDYTGTSMV ERELLLAKVS LLGPDHFQEH FERSEKVAES 180
  181 TNAKAKSDGE GVMNANAALQ LRASQLAAIN QLTTLFHGRV ADISTETIIL ELTATPDRVD 240
  241 NFLSLLRPYG VLEACRTGTS AMTRAPHSNE VTEEAEDDVE VEEVFLPPG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	52.30103
Match:	2pc6A
Description:	No description for 2pc6A was found.

Predicted functions:

Term	Confidence	Notes
acetolactate synthase activity	14.1096734416761	bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups	12.4176994384119	bayes_pls_golite062009
catalytic activity	0.645256181736122	bayes_pls_golite062009
transcription regulator activity	0.248470717905239	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: