| Protein: | SPBC530.08 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 815 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC530.08.
| Description | E-value | Query Range |
Subject Range |
|
|
304.0 | [0..1] | [778..42] |
|
|
303.0 | [0..17] | [782..55] |
|
|
298.0 | [0..4] | [797..44] |
|
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296.0 | [0..17] | [782..55] |
|
|
290.0 | [0..1] | [803..39] |
|
|
289.0 | [0..2] | [778..34] |
|
|
272.0 | [0..11] | [764..1] |
|
|
271.0 | [0..1] | [802..40] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MDNESHSQET ESKILEGAKV ATRRRRVTRA CDMCRRKKIK CDGLRPCKNC KAGKLECTYH 60
61 MPSSRKSSFS PEYVENLESR VRYLETLLKK NTNFDLSSNS PSFLFFLREQ KFQATNELEN 120
121 MSPERKVIFT SMINYGNLFV
|
| Detection Method: |  |
| Confidence: | 7.0 |
| Match: | 1ajyA |
| Description: | PUT3 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [141-239] |
1 11 21 31 41 51
| | | | | |
1 DAKHGTRYFR GGSSIHVLIQ HLIRRLPGDF EICEPYSAYP LGNKNIQFDD NDPEYQFFTP 60
61 TPRFSIDFMV SSVDPREIQL PGIEEALCIT KAAVSYVSG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.513 | a.29.2 | Bromodomain |
| View | Download | 0.511 | a.29.2 | Bromodomain |
| View | Download | 0.492 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.474 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.468 | a.29.10 | Description not found. |
| View | Download | 0.455 | a.130.1 | Chorismate mutase II |
| View | Download | 0.452 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.439 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.432 | a.29.2 | Bromodomain |
| View | Download | 0.413 | a.3.1 | Cytochrome c |
| View | Download | 0.358 | a.3.1 | Cytochrome c |
| View | Download | 0.313 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.302 | d.254.1 | Description not found. |
| View | Download | 0.291 | a.39.4 | Hypothetical protein MTH865 |
| View | Download | 0.282 | b.55.1 | PH domain-like |
|
Region A: Residues: [240-414] |
1 11 21 31 41 51
| | | | | |
1 IVFYTTYADF PKKIRLLYSG NYQGNFFPLF LSILCVGYYH HLLNNPSNTE LQSLIKKYSF 60
61 YSERLVKSAD NFTIESIQCL LILSIYRYCR TEISAAWYYM KLGLNCCLRL GLHRNITEGF 120
121 TEEQIDSRRR IFWAIYCYDR QLCTLFGFPL GVRDEDIDQC LPVTPKFPSV TEIEA
|
| Detection Method: | |
| Confidence: | 23.21467 |
| Match: | PF04082.5 |
| Description: | No description for PF04082.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [415-635] |
1 11 21 31 41 51
| | | | | |
1 NARLFFFHGV KLYKISSRIL TKLYSPNSRN VTKKHISYAV IQDLEQLLDG FYNSLPRVFR 60
61 AEQPGEFQAN HFFYNLQLVY YSFRMLIYRP LLHYLEADSP AMQALKVPDR QTAFTLACKC 120
121 VDSAIVCVQN LSHLSKGLKR TLDRYYWTTV YCGFSTIVTL IFAALLTKNT NLLIHISVAR 180
181 ESIEALAHEC VTRRLLPLID KMRESLMKIL ESNADGYKQM S
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [636-722] |
1 11 21 31 41 51
| | | | | |
1 PTKAPQVFES ESNVPINNGP QQSIDKESNS NTQLPQVETE GQQQSVFDGN IGTIPYQAYN 60
61 MNEDSFIDIN TLSSMLNYHT QAVSIHH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.582 | d.129.6 | Description not found. |
| View | Download | 0.420 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.387 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.336 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.314 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.290 | d.50.5 | Description not found. |
| View | Download | 0.286 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.284 | b.34.9 | Tudor/PWWP/MBT |
| View | Download | 0.276 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.203 | d.50.1 | dsRNA-binding domain-like |
|
Region A: Residues: [723-815] |
1 11 21 31 41 51
| | | | | |
1 PSFYISRSDV PLEEEFQIPN ELLAVDPVAE SMQENSDIIN EAFGLVDPDV SDGKSRESSS 60
61 LNNSTPFNPT VNIDPASILE HFSQNVMKDS QNS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.423 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.420 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.385 | N/A | N/A | a.160.1 | Poly(A) polymerase, middle domain |
| View | Download | 0.350 | N/A | N/A | a.29.8 | Description not found. |
| View | Download | 0.350 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.313 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.266 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.243 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.207 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
