YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC1851.02
Organism:	Schizosaccharomyces pombe
Length:	279 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1851.02.

Description	E-value	Query Range	Subject Range
SLC1 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, catalyzes the acylation of lysophosphatidic acid to ... PLSC_YEAST - Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204...	204.0	[0..25]	[270..1]
gi\|49081218, gi\|... - gi\|71024687\|ref\|XP_762573.1\| hypothetical protein UM06426.1 [Ustilago maydis 521], ref\|XP_404041.1\| ...	195.0	[0..28]	[275..26]
gi\|49526736, gi\|... - gi\|50289989\|ref\|XP_447426.1\| hypothetical protein CAGL0I04070g [Candida glabrata CBS138], gi\|4952673... gi\|49526736 - gi\|49526736\|emb\|CAG60363.1\| unnamed protein product [Candida glabrata]	192.0	[0..25]	[270..1]
gi\|49643139 - gi\|49643139\|emb\|CAG99091.1\| KLLA0E01233p [Kluyveromyces lactis] gi\|49643139, gi\|... - gi\|50308007\|ref\|XP_454004.1\| unnamed protein product [Kluyveromyces lactis], gi\|49643139\|emb\|CAG9909...	191.0	[0..25]	[270..1]
gi\|83775160 - gi\|83775160\|dbj\|BAE65283.1\| unnamed protein product [Aspergillus oryzae] gi\|169783908 - gi\|169783908\|ref\|XP_001826416.1\| hypothetical protein [Aspergillus oryzae RIB40]	189.0	[0..33]	[272..33]
gi\|59479110, gi\|... - gi\|59711009\|ref\|YP_203785.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio fischeri ES114],...	189.0	[0..34]	[279..11]
gi\|46124529, gi\|... - gi\|46124529\|ref\|XP_386818.1\| hypothetical protein FG06642.1 [Gibberella zeae PH-1], gi\|42554735\|gb\|E...	186.0	[0..14]	[275..10]
gi\|134115931, gi... - gi\|50255976\|gb\|EAL18705.1\| hypothetical protein CNBI2930 [Cryptococcus neoformans var. neoformans B-... gi\|58270774, gi\|... - gi\|58270774\|ref\|XP_572543.1\| 1-acylglycerol-3-phosphate O-acyltransferase [Cryptococcus neoformans v...	185.0	[0..5]	[272..3]
gi\|66852832, gi\|... - gi\|71001026\|ref\|XP_755194.1\| 1-acylglycerol-3-phosphate acyltransferase (AtaAp) [Aspergillus fumigat... gi\|159129283 - gi\|159129283\|gb\|EDP54397.1\| 1-acylglycerol-3-phosphate acyltransferase (AtaAp), putative [Aspergillu...	184.0	[0..33]	[271..33]

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Predicted Domain #1

Region A:
Residues: [1-279]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFIKSTLLA TVTVFVGLCG INRFFTLPKC IRYHFRYFAC HTFLAISSAY GVIASVVARL  60
   61 CGYPVMGQYL TAKAYYGLAS TILDFRFKIE NEEILRKHKS AVLVVNHQSE LDILAIGRTF 120
  121 GPNYSVIAKK SLRYVPILGW FMILSDVVFI DRSRRSDAIQ LFAKAARRMR KENISIWVFA 180
  181 EGTRSYSLKP CLLPLKKGAF HLAVQAQVPI IPIAIQTYGH LFHPPTKVFN KGEALIKVLD 240
  241 PIPTEGKTAE DVNDLLHETE TAMNNALVEI DDYGKVKKQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.522879
Match:	1iuqA
Description:	The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits