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View Structure Prediction Details

Protein: SPAC3A12.09c
Organism: Schizosaccharomyces pombe
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC3A12.09c.

Description E-value Query
Range		 Subject
Range
URED_PROMH - Urease accessory protein UreD OS=Proteus mirabilis (strain HI4320) GN=ureD PE=1 SV=1
URED_PROMI - Urease accessory protein ureD OS=Proteus mirabilis GN=ureD PE=1 SV=1
 260.0 [0..8] [289..15]
gi|25348453 - pir||AC2264 urease accessory protein D [imported] - Nostoc sp. (strain PCC 7120)
URED_NOSS1 - Urease accessory protein UreD OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=ureD PE=3 SV=1
 258.0 [0..4] [289..11]
URED_DECAR - Urease accessory protein UreD OS=Dechloromonas aromatica (strain RCB) GN=ureD PE=3 SV=1
 257.0 [0..5] [289..19]
URED_ANAVT - Urease accessory protein UreD OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ureD PE=3 SV=...
 255.0 [0..1] [289..8]
URED_ECOLX - Urease accessory protein UreD OS=Escherichia coli GN=ureD PE=2 SV=1
 254.0 [0..8] [289..15]
URED_PSE14 - Urease accessory protein UreD OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=...
 253.0 [0..5] [289..17]
URED2_PSESM - Urease accessory protein UreD 2 OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=ureD2 PE=3 SV=...
URED2_PSESM - Urease accessory protein ureD 2 OS=Pseudomonas syringae pv. tomato GN=ureD2 PE=3 SV=1
 252.0 [0..5] [289..17]
URED_NOSP7 - Urease accessory protein UreD OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ureD PE=3 SV=...
 252.0 [0..2] [289..9]
URED2_PSEU2 - Urease accessory protein UreD 2 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ureD2 PE=3 SV...
 250.0 [0..5] [289..17]
gi|45774393 - gi|45774393|gb|AAS76787.1| UreD [Nitrosospira sp. NpAV]
 247.0 [0..2] [289..38]

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Predicted Domain #1
Region A:
Residues: [1-85] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDKEGRFRV ECIENVHYVT DMFCKYPLKL IAPKTKLDFS ILYIMSYGGG LVSGDRVALD  60
   61 IIVGKNATLC IQSQGNTKLY KQIPG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-191] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPATQQKLDV EVGTNALCLL LQDPVQPFGD SNYIQTQNFV LEDETSSLAL LDWTLHGRSH  60
   61 INEQWSMRSY VSKNCIQMKI PASNQRKTLL RDVLKIFDEP NLHIGL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [192-290] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAERMHHFEC IGNLYLIGPK FLKTKEAVLN QYRNKEKRIS KTTDSSQMKK IIWTACEIRS  60
   61 VTIIKFAAYN TETARNFLLK LFSDYASFLD HETLRAFWY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

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