| Protein: | SPBC405.06 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 413 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC405.06.
| Description | E-value | Query Range |
Subject Range |
|
|
375.0 | [0..2] | [413..4] |
|
|
373.0 | [0..2] | [412..5] |
|
|
369.0 | [0..1] | [412..100] |
|
|
369.0 | [0..2] | [413..4] |
|
|
364.0 | [0..2] | [413..4] |
|
|
364.0 | [0..2] | [413..4] |
|
|
363.0 | [0..1] | [412..1] |
|
|
363.0 | [0..4] | [413..298] |
|
|
362.0 | [0..2] | [385..1] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MVVDTKLYDI LEVHFEASAE EIKKSYKRLA LLHHPDKAPI HEKEEAAERF RGVQEAYDIL 60
61 KDPESREMYD MYGMNSDSNS QFDGGVNLDD VLAQMFGMNF EAGGPGKNVP R
|
| Detection Method: |  |
| Confidence: | 22.69897 |
| Match: | 1bq0A |
| Description: | J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 3.04403163860617 | bayes_pls_golite062009 |
| chaperone binding | 2.86745334638583 | bayes_pls_golite062009 |
| protein binding | 2.65982681685488 | bayes_pls_golite062009 |
| binding | 2.63138872417193 | bayes_pls_golite062009 |
| heat shock protein binding | 2.17994194200939 | bayes_pls_golite062009 |
| transcription regulator activity | 1.91297632253219 | bayes_pls_golite062009 |
| nucleic acid binding | 1.6342534817623 | bayes_pls_golite062009 |
| DNA binding | 1.55234338199368 | bayes_pls_golite062009 |
| transporter activity | 1.29863098651348 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.812144232432417 | bayes_pls_golite062009 |
| protein transporter activity | 0.599800483479766 | bayes_pls_golite062009 |
| Hsp70 protein binding | 0.541755903922701 | bayes_pls_golite062009 |
| transferase activity | 0.240656521918556 | bayes_pls_golite062009 |
| catalytic activity | 0.106988907594358 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0276971914937192 | bayes_pls_golite062009 |
|
Region A: Residues: [112-413] |
1 11 21 31 41 51
| | | | | |
1 DRKRRGSDVI HDYEISLEDM FKGKEVKLRA TRNTLCPRCQ GRGGKRFAKE KPCLSCDGKG 60
61 VKQHLKHVGP HHVTNSQVIC DTCNGKGVSF RGKDRCKHCK GSGTVPEQRM LSFFVNRSAK 120
121 ENDKIIQRGM ADEAYGITPG DVILQLHQKP HPVFERLGDD LKAKLKISLA EALTGFNRVI 180
181 LTTLDGRGLE YVQPIGKILH PGDCLIIPGE GMYKDSKTDL RGDLYLEVDI EFPKDGLIGT 240
241 TEIEILRDIL PSIPKVSVMD DTLIDSVRGV PGDISHFGGD ARYANEDYGD ETYEGVPECQ 300
301 AQ
|
| Detection Method: | |
| Confidence: | 52.39794 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.7298921704023 | bayes_pls_golite062009 |
| protein binding | 2.6297172985864 | bayes_pls_golite062009 |
| protein disulfide isomerase activity | 2.4409950647303 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing S-S bonds | 2.4409950647303 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, interconverting keto- and enol-groups | 2.23398279564144 | bayes_pls_golite062009 |
| unfolded protein binding | 2.04158808514315 | bayes_pls_golite062009 |
| receptor binding | 0.395342079633271 | bayes_pls_golite062009 |
| catalytic activity | 0.276917867171685 | bayes_pls_golite062009 |
