YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC713.07c
Organism:	Schizosaccharomyces pombe
Length:	577 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC713.07c.

Description	E-value	Query Range	Subject Range
gi\|38104511, gi\|... - gi\|39945684\|ref\|XP_362379.1\| hypothetical protein MG04825.4 [Magnaporthe grisea 70-15], gb\|EAA51065....	369.0	[0..2]	[530..3]
gi\|49086486, gi\|... - gi\|67517955\|ref\|XP_658752.1\| hypothetical protein AN1148.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	345.0	[0..5]	[532..4]
PPN1_ASHGO - Endopolyphosphatase OS=Ashbya gossypii GN=PPN1 PE=3 SV=1 PPN1_ASHGO - Endopolyphosphatase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN...	343.0	[0..6]	[524..27]
gi\|85118098 - gi\|85118098\|ref\|XP_965382.1\| hypothetical protein gi\|11290783, gi\|... - gi\|32419479\|ref\|XP_330183.1\| hypothetical protein ( hypothetical protein B24P7.140 [imported] - Neur...	336.0	[0..33]	[530..67]
gi\|68471067, gi\|... - gi\|77022570\|ref\|XP_888729.1\| hypothetical protein CaO19_7016 [Candida albicans SC5314], gi\|68471067\|... gi\|76573542 - gi\|76573542\|dbj\|BAE44626.1\| hypothetical protein [Candida albicans]	318.0	[0..24]	[525..72]
PPN1_NEUCR - Endopolyphosphatase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / F... PPN1_NEUCR - Endopolyphosphatase OS=Neurospora crassa GN=ppn-1 PE=3 SV=2	315.0	[0..33]	[530..41]
gi\|41581226 - gi\|41581226\|emb\|CAE47875.1\| phosphoesterase, putative [Aspergillus fumigatus] gi\|66850149, gi\|... - gi\|70995518\|ref\|XP_752514.1\| vacuolar endopolyphosphatase [Aspergillus fumigatus Af293], gi\|66850149...	311.0	[0..6]	[532..10]
gi\|42545587, gi\|... - gi\|46108536\|ref\|XP_381326.1\| hypothetical protein FG01150.1 [Gibberella zeae PH-1], gi\|42545587\|gb\|E...	300.0	[0..15]	[525..18]
PPN1 - Vacuolar endopolyphosphatase with a role in phosphate metabolism; functions as a homodimer PPN1_YEAST - Endopolyphosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PPN1 PE=1 SV=1	291.0	[0..24]	[531..72]
gi\|54637170, gi\|... - gi\|54637170\|gb\|EAL26573.1\| GA17413-PA [Drosophila pseudoobscura], gi\|125811710\|ref\|XP_001361994.1\| G...	289.0	[0..1]	[393..209]

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Predicted Domain #1

Region A:
Residues: [1-419]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPSVITVAV LFVQSTWASF AFGNPMSMRN KAHTNDLVNS KGKPLVGRFL HITDMHPDIY  60
   61 YEKGSTVDHY CHSYDHNSDD TPLGKSKVGY LSPGPGYECD SSPALIDKTL EWLKEHQDDV 120
  121 LGGIDFILWT GDNSRHDNDN HFPRTQSEIL ASNEDLVNKM IEAFPDVPIV SAIGNNDIYP 180
  181 HNIMEAGPSS MTRQLAGAWD ALIPYEERHT FEKGSYYLCD VIPDKLAAIS INTLYLSNKN 240
  241 AAVDGCPDDN LDEPGSLFMR WFKIQLEAYR LKGMKVWLLG HIPPTRGQWY EDCYTSFTDL 300
  301 LYEFRDIIVG QLYGHMNINH FVFLEFDKLP VDTESYGIKS AQPKYVKSLI DAQYAELPTF 360
  361 PENLTEEFLN GTVGNYSLAT VGGSIIPEMF PTFRVYEYNI SDIANQLDDR EELTEITSF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	51.0
Match:	1xzwA
Description:	Sweet potato purple acid phosphatase/phosphate complex
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [420-577]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NWETLEEQSQ SDYEIDKKKK KKKKNNKKKK KNKRKNIKPG PLGPAYVPSL FTPISFKQYF  60
   61 LNTSNYMDAT KDTEISYELL YTSKDSPYNM PDLTVPEYMR LAKRIATCDK PEDPHQFKLQ 120
  121 SGDQNTFRIS KKKKPSICPI AYTYLWHAYI GSISDFED

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits