| Protein: | SPAC6G10.05c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1210 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC6G10.05c.
| Description | E-value | Query Range |
Subject Range |
|
|
1085.0 | [0..9] | [1113..109] |
|
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1079.0 | [0..9] | [1113..109] |
|
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1062.0 | [0..1] | [1113..355] |
|
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1062.0 | [0..9] | [1113..11] |
|
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1059.0 | [0..9] | [1113..11] |
|
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1037.0 | [0..9] | [1113..11] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MEFDFFSFVA PSRVQSLVLP FGRVRRKSFS SYLQLLRRVS HIQLSDVPVA TATRKSSSFN 60
61 PLAFPLGRLV YNFLTSLDDQ QALLEEFEYF RRVFVLIGIV DGSEEQEVEQ LCSTLDVWRR 120
121 RIPHALVAKC IVFNCPEDKE NIFNAPNIII GPRSDFSINS VMRSILCDIT AELLEGFSSL 180
181 EFSIHARSVI LSPITDM
|
| Detection Method: |  |
| Confidence: | 85.251812 |
| Match: | PF08626.2 |
| Description: | No description for PF08626.2 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [198-327] |
1 11 21 31 41 51
| | | | | |
1 PHLAPLQRKN SNASIHSLGS SSRPTLTRTP SITSRSVNSV TERSKSLSKG RIENQFGQLY 60
61 LLAGRVPNAL KHFSTAIALS KATGDFLWQG LSLELFTVCL VIMAHLHVDV QIPPNILSMF 120
121 PSYNDRLNAF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [328-526] |
1 11 21 31 41 51
| | | | | |
1 GPLKFDALLN FITEMRNVVD QLYQKSTLQP NDAVPGLCFS ESILRYAHLL TVVYSCKGFN 60
61 DNALDHIIAQ APIRPVKKAT TYVPNKATIC QWIMRAQGQH LNSLSIRERC RIYGAMANML 120
121 GSIGFSRLRV KMLRELVASL TPVLLETRRQ NASKNGIHPE VIASHTAQSF KSTHYCNILP 180
181 LISEICQEYG LLKTDGSLL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [527-663] |
1 11 21 31 41 51
| | | | | |
1 NPELTKWGWS NLQFDVLNEL ISLCDSLSDY RSILLLISLF FLTSVQTASS SQQISMFKAF 60
61 RKTYLFASNA GIHINAPYWD PFMITDLKFI GSSENAELIH QRLRNGLPKS IEKGPFIYNP 120
121 FNRRQDQNQS KSVLVVD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.813 | 0.037 | ER to Golgi vesicle-mediated transport | a.24.4 | Hemerythrin |
| View | Download | 0.754 | 0.037 | ER to Golgi vesicle-mediated transport | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.756 | 0.037 | ER to Golgi vesicle-mediated transport | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.713 | 0.037 | ER to Golgi vesicle-mediated transport | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.711 | 0.037 | ER to Golgi vesicle-mediated transport | a.24.4 | Hemerythrin |
|
Region A: Residues: [664-993] |
1 11 21 31 41 51
| | | | | |
1 EQVAFSIYFR NPLSVSVEVQ DVHLETKGVS AKCSHSTFTM RPLSIERTTL TVTPTETGEL 60
61 HIVGCRVKVF GCEPILQYVY EAKDKHKSLH VYLEKSKDVN AELRSLDTID HLWTYFPFKK 120
121 DLKTKSFDCI VIASQPKLSL AFQNLTSGKF NFAEYETGEL VYVIENTSFV EASHISVLFE 180
181 DSSSKAFEQA IADKSITADR LYELQFEEFN LPTFTVESSQ PFSLSPGERR EIHIKIRAKP 240
241 NSQEGLILFE SSVHKPEDTE FYVRRLRIPV SLNISKRVDL KQWSAFMDTE GDPSYCLVLL 300
301 NFYNHFSEPL FVTVKTASTD ESRSVLIKPK
|
| Detection Method: | |
| Confidence: | 1.07 |
| Match: | 2qsvA |
| Description: | No description for 2qsvA was found. |
|
Region A: Residues: [994-1121] |
1 11 21 31 41 51
| | | | | |
1 ADNVILFRLK RFIMSSEEIN LDIPNLSTKQ FVLSSGFKKS IEDSYTMKKR FWIKEYFLKE 60
61 VQASWKTDDN LHHGEIYLRN HILSDEMANN LSILPIRIQA WVSYDSEKVT TVCPREPFKL 120
121 VLEFFGHA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.523 | 0.203 | ER to Golgi vesicle-mediated transport | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.556 | 0.075 | ER to Golgi vesicle-mediated transport | a.22.1 | Histone-fold |
| View | Download | 0.499 | 0.026 | ER to Golgi vesicle-mediated transport | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.552 | 0.008 | ER to Golgi vesicle-mediated transport | d.41.5 | Molybdopterin synthase subunit MoaE |
| View | Download | 0.493 | 0.007 | ER to Golgi vesicle-mediated transport | d.232.1 | Mago nashi protein |
|
Region A: Residues: [1122-1210] |
1 11 21 31 41 51
| | | | | |
1 DTNMRYKISW TQLNTQANTS SFNGLILDGP EEDIVCFNNS KCHVVIERNM FAYTTGMYNI 60
61 FVRIFNEELQ LLSQPVDLDE PILLIVDAK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.443 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.468 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.475 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.469 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.404 | a.57.1 | Protein HNS-dependent expression A; HdeA |
