YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC27.01c
Organism:	Schizosaccharomyces pombe
Length:	132 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC27.01c.

Description	E-value	Query Range	Subject Range
gi\|1236274 - gi\|1236274\|dbj\|BAA12198.1\| unnamed protein product [Schizosaccharomyces pombe]	139.0	[0..1]	[116..1]
gi\|85102566 - gi\|85102566\|ref\|XP_961357.1\| hypothetical protein NCU03630 [Neurospora crassa OR74A] gi\|32404638, gi\|... - gi\|32404638\|ref\|XP_322932.1\| hypothetical protein [Neurospora crassa], gi\|28922901\|gb\|EAA32121.1\| pr...	139.0	[0..4]	[116..18]
gi\|46125611, gi\|... - gi\|46125611\|ref\|XP_387359.1\| hypothetical protein FG07183.1 [Gibberella zeae PH-1], gi\|42553430\|gb\|E...	133.0	[0..4]	[132..42]
gi\|145019453, gi... - gi\|39946150\|ref\|XP_362612.1\| hypothetical protein MGG_08195 [Magnaporthe grisea 70-15], gb\|EAA57226....	121.0	[0..4]	[132..12]
gi\|190409135 - gi\|190409135\|gb\|EDV12400.1\| hypothetical protein SCRG_03283 [Saccharomyces cerevisiae RM11-1a] PGA2_YEAST - Processing of GAS1 and ALP protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PGA... gi\|151944388 - gi\|151944388\|gb\|EDN62666.1\| processing of gas1p and alp [Saccharomyces cerevisiae YJM789] PGA2 - Essential protein required for maturation of Gas1p and Pho8p; involved in protein trafficking; GFP-f...	113.0	[0..9]	[132..16]
gi\|44984524 - gi\|44984524\|gb\|AAS53426.1\| AFR055Wp [Ashbya gossypii ATCC 10895] gi\|44984524, gi\|... - gi\|45198573\|ref\|NP_985602.1\| AFR055Wp [Ashbya gossypii ATCC 10895], gi\|44984524\|gb\|AAS53426.1\| AFR05...	111.0	[0..3]	[132..9]
orf19.10347, orf... - orf19.2829 CGDID:CAL0005091 Assembly 19, Contig19-10161 (43233, 43616) CDS, translated using codon t... gi\|68480422, gi\|... - gi\|68480530\|ref\|XP_715760.1\| hypothetical protein CaO19.2829 [Candida albicans SC5314], gi\|68480422\|...	105.0	[0..16]	[132..18]
gi\|67516631, gi\|... - gi\|67516631\|ref\|XP_658201.1\| hypothetical protein AN0597.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	90.0	[0..4]	[89..35]
gi\|88183102, gi\|... - gi\|88183102\|gb\|EAQ90570.1\| hypothetical protein CHGG_02505 [Chaetomium globosum CBS 148.51], gi\|1162...	80.0	[0..30]	[131..19]
gi\|49640631, gi\|... - gi\|50303125\|ref\|XP_451500.1\| unnamed protein product [Kluyveromyces lactis], gi\|49640631\|emb\|CAH0308... gi\|49640631 - gi\|49640631\|emb\|CAH03088.1\| KLLA0A11506p [Kluyveromyces lactis]	73.0	[0..4]	[132..10]

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Predicted Domain #1

Region A:
Residues: [1-132]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFDVAGYLQ SYSLKDWIRI IVYVGGYMLI RPYLMKLGAK IQEREHRKSL LEGEVDGTLD  60
   61 PEMTHGTKPK EHGEFDTDDE EEEENPDAEF RWGYSARRRI RKQREEYFKN QDKSPLDAYA 120
  121 DDDEDIEEHL ED

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	102.585027
Match:	PF07543.3
Description:	No description for PF07543.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits