| Protein: | ppk30 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 953 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ppk30.
| Description | E-value | Query Range |
Subject Range |
|
|
349.0 | [0..13] | [741..211] |
|
|
330.0 | [0..3] | [741..2] |
|
|
329.0 | [0..3] | [741..2] |
|
|
328.0 | [0..1] | [741..1] |
|
|
327.0 | [0..3] | [741..2] |
|
|
323.0 | [0..1] | [741..1] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MTEVYSKAPA TVGQVKLSNN GTSNKAYSVP KSPAPVRTDL FSKIPAGTKI QVGSHSVIIQ 60
61 R
|
| Detection Method: |  |
| Confidence: | 42.0 |
| Match: | 1q3dA |
| Description: | GSK-3 Beta complexed with Staurosporine |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [62-552] |
1 11 21 31 41 51
| | | | | |
1 YLSEGGFSHV YLALLENEKP FVLKRIYVPD KTALQLVHGE IETMKRLKGH RHIVNYIDSS 60
61 ALYSKSENRY EVYLLMEFCA GGGLIDFMNT RLQHRLTEGE ILKILADVCD AVAAMHYLDP 120
121 PLIHRDLKIE NVLLVAPNSY KLCDFGSACE PLAPATTPDT IMFLEQNIAA YTTPQYRAPE 180
181 MIDINRRQGI DEKSDIWAIG VLAYKLCYYT TPFEQVGNSA ILKASFSFPP FPRYSDRMKR 240
241 FIATCLQEQP SHRPNIYQTL KEIMEMQGTP LKLPDVYGGV NASTYNPPRA PLQRTPSGSL 300
301 TPLSSRPAHT SLPPIPTVQT TSSNVPPVNR PSLKSKSPSV SNILSNQLSP ISSANNDVMA 360
361 RLQPKSPIPA TKSYSATIQT PRSPSLRRAD STSHIIKVPH LPDTSVKTAK TGASEIDVLS 420
421 RYPSVEEIDK ITDKIEVSKP LRNSGPLAFK PFEKISANKQ TDLLQNKPEA LLDLENRFLP 480
481 KPSPKPSEFS S
|
| Detection Method: | |
| Confidence: | 48.69897 |
| Match: | 1koaA |
| Description: | TWITCHIN KINASE FRAGMENT (C.ELEGANS), AUTOREGULATED PROTEIN KINASE AND IMMUNOGLOBULIN DOMAINS |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [553-629] |
1 11 21 31 41 51
| | | | | |
1 SVGSKQNLSM DIPSVQNVST KQKSTNDTDN SKLKINKPLT GGYAPLPSRP NRMNHSVLNE 60
61 KSNKEFVRGP RVLPPIE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [630-953] |
1 11 21 31 41 51
| | | | | |
1 VSSSKMAGLD IRKEPFTPAV PSAKSGLKKD QSSEVANKDV VSKNKDNIAI LADREARPQL 60
61 LLDDNNDSSS SSSEHLISFN NHTGNKILSR QTTSSSIDSN NVQSNIEFLK GLNATHARST 120
121 SQVSHTQRLQ QSISTSLERV KSNTKKESNS PRQVSKLKRP IGASNKILSG KFGEAFKKFE 180
181 FGGEKMSRRR KSETKKNLVS ILPDTEVDEY PKASNEWIVE SEELPQVHET INQYRKSCET 240
241 QRSRKSHEGS NDLERQPSSP DTVHPGIKRS HFIRERVKQL LSDANKHHQS PSDSETDRTP 300
301 DSSSIHLPHI ERLNLFHTKS ESLE
|
| Detection Method: | |
| Confidence: | 14.30103 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
