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View Structure Prediction Details

Protein: mal1
Organism: Schizosaccharomyces pombe
Length: 579 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mal1.

Description E-value Query
Range
Subject
Range
gi|66865849 - gi|66865849|gb|AAY57566.1| maltase [Schizosaccharomyces pombe]
465.0 [0..1] [579..1]
gi|49655018, gi|... - gi|50421595|ref|XP_459350.1| hypothetical protein DEHA0E00627g [Debaryomyces hansenii CBS767], gi|49...
448.0 [0..1] [577..1]
gi|75812283 - gi|75812283|dbj|BAE45038.1| trehalose-6-phosphate hydrolase [Geobacillus stearothermophilus]
441.0 [0..13] [579..6]
O16G_GEOTM - Oligo-1,6-glucosidase OS=Geobacillus thermoglucosidasius GN=malL PE=1 SV=1
440.0 [0..13] [579..5]
gi|220933085, gi... - gi|89209664|ref|ZP_01188059.1| Alpha amylase, catalytic region [Halothermothrix orenii H 168], gi|89...
438.0 [0..11] [579..3]
gi|8096681 - gi|8096681|gb|AAF71997.1|AF216220_1 alpha-glucosidase [Bacillus sp. DG0303]
436.0 [0..13] [579..5]
gi|56380123, gi|... - gi|56420281|ref|YP_147599.1| alpha,alpha-phosphotrehalase [Geobacillus kaustophilus HTA426], gi|5638...
435.0 [0..13] [579..6]
O16G_BACCE - Oligo-1,6-glucosidase OS=Bacillus cereus GN=malL PE=1 SV=1
433.0 [0..11] [579..3]
gi|169774137 - gi|169774137|ref|XP_001821536.1| hypothetical protein [Aspergillus oryzae RIB40]
gi|83769399 - gi|83769399|dbj|BAE59534.1| unnamed protein product [Aspergillus oryzae]
433.0 [0..5] [576..8]
gi|46115722, gi|... - gi|46115722|ref|XP_383879.1| hypothetical protein FG03703.1 [Gibberella zeae PH-1], gi|42548673|gb|E...
432.0 [0..7] [579..10]

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Predicted Domain #1
Region A:
Residues: [1-579]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVVPSEKIK PNWWRETSVY QIYPASFKDS NGDGFGDLEG IISKVDYLKA LNVESIWLCP  60
   61 IYPSPLKDMG YDVSDYKQID SRYGTLEDLD RLMKALHERD MKLVMDLVLN HTSDQHEWFK 120
  121 ESRSSKTNPK RDWYFWKPAR YNEKGERLPP NNWRSYFDTS AWEWDEATQE YYLHLWSVGQ 180
  181 PDLNWETPKV REAVHDILRF WLDRGVDGFR LDAINMISKD QRFLDAPITD DRYEYQLAYQ 240
  241 YYANGPRIHE YLNGIGNILT EYDAFSVGEM PYVLDTNEIL HVVGADRREL TMIFQFDFVD 300
  301 LDLDPNQHKY IEGSWELSDL KKSLKKWQSA LLSGGGWNAS FIENHDQTRT VSRYLSDSPK 360
  361 YRAYSSKLMA LFIIFQSGTP FVFQGQELAL ANIPRDWPID EYLDVETQNF WKLFMSGNPS 420
  421 QEEIEKTMDI VNKRARDNGR TPMHWDSSPN GGFTKAGVKP WMRVTNDYKE WNAANQVNDP 480
  481 ESPYTFWSKA LELRKELKDA VVYGSFELIS EEDPSIVAFV RESSTYKLII LLNFTGNKVS 540
  541 YDCPLNLTSY EILLDNYKDF ICMTSPVTLN PYQAVLLKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 122.0
Match: 1uokA
Description: CRYSTAL STRUCTURE OF B. CEREUS OLIGO-1,6-GLUCOSIDASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 4.11319792356479 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.92012282533754 bayes_pls_golite062009
hydrolase activity 3.21770945631891 bayes_pls_golite062009
chitinase activity 2.45357334610104 bayes_pls_golite062009
structural molecule activity 2.28030619331997 bayes_pls_golite062009
trehalase activity 2.11042620996316 bayes_pls_golite062009
alpha-amylase activity 2.09193270404736 bayes_pls_golite062009
amylase activity 2.03484942782894 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
alpha-glucosidase activity 0.96543619590958 bayes_pls_golite062009
glucosidase activity 0.766503513427695 bayes_pls_golite062009
hexosaminidase activity 0.763360027922833 bayes_pls_golite062009
binding 0.63693798355947 bayes_pls_golite062009
carbohydrate binding 0.4998423581103 bayes_pls_golite062009
maltase activity 0.442635030512661 bayes_pls_golite062009
sugar binding 0.36459095255871 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.266938437560648 bayes_pls_golite062009
beta-N-acetylhexosaminidase activity 0.263065978664289 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle