| Protein: | SPCC132.04c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1106 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC132.04c.
| Description | E-value | Query Range |
Subject Range |
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1114.0 | [0..43] | [1103..2] |
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1109.0 | [0..43] | [1103..2] |
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1042.0 | [0..46] | [1094..1] |
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1042.0 | [0..64] | [1104..21] |
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1039.0 | [0..41] | [1094..10] |
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1021.0 | [0..50] | [1104..53] |
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1008.0 | [0..50] | [1094..53] |
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1005.0 | [0..42] | [1104..36] |
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983.0 | [0..39] | [1103..3] |
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983.0 | [0..51] | [1100..38] |
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Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MYLTKQIPHY SRIHTTQLLT VVNHRTIPFK IRGSFSNCRR YSNFATVPLL ERPFKNKSKH 60
61 NTARASRPFS TQKMLLTKSH PPNMYKD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [88-140] |
1 11 21 31 41 51
| | | | | |
1 SVFFGYRPIV FSGKQDQKSK VIQCLRTERK TIPDDLVEDE VDRFYNKLGL DDY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [141-243] |
1 11 21 31 41 51
| | | | | |
1 YFQMEPVSII ADHIEIIYAA KIAAHASHAK EELNIHVKNE NEDLAIYLDS SPVTQPELDQ 60
61 SSAVEESIST RYLDPFKLTD PTAYRVESFT SVTNIDRTST ENS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.891 | d.52.8 | Description not found. |
|
Region A: Residues: [244-398] |
1 11 21 31 41 51
| | | | | |
1 NIYTYFVTKC DFVDNPKKDA SPDVPTDIAS VSDKTFLEKA SDNTIEMYQD VMNSVLTRFG 60
61 PVVRLFDYQG RSEIRLVVGY RRGSIFQYFP SLSKLFRYYG LHSTRTYVEQ FSNGVTIISY 120
121 NFKPELFKNA AVTSINELFS QITREASLLY CLPST
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [399-503] |
1 11 21 31 41 51
| | | | | |
1 DFQPLFVSEK LSIQEVTYAH CVRIFCEHVM NKLGPEYSSL SAILDHSNNI HAEILETIKR 60
61 RLSTLAFTRT KIHDTIMQYP GLVHTLFEQF YLEHAINHNS TPHLH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [504-1106] |
1 11 21 31 41 51
| | | | | |
1 RAKSATSLAD EASTYSITPM SATALMDLIQ KTCTNEEDVS VMEMFVKFNT HLLKTNFFQT 60
61 TKVALSFRFD PSFLDSTQYK DPLYAMIMSI GNEFRGFHLR FRDVARGGIR LIKSANPEAF 120
121 GLNARGLFDE NYNLAKTQML KNKDIPEGGA KGVILLGKDC QDKPELAFMK YIDSIIDLLI 180
181 VNKSQPLVDK LGKPEILFMG PDENTADLVN WATIHAHRRN APWWKSFFTG KKPTMGGIPH 240
241 DKYGMTSLSV RCYVEGIYKK LNITDPSKLT KVQTGGPDGD LGSNEIKLSN EKYIAVIDGS 300
301 GVLYDPAGLD RTELLRLADE RKTIDHFDAG KLSPEGYRVL VKDTNLKLPN GEIVRNGTIF 360
361 RNTAHLRYKA DTFVPCGGRP NAININNVEQ LIDDHGRPAF KYLVEGANLF ITQDAKSVLE 420
421 KAGVIVIRDA SANKGGVTSS SLEVLASLSF DDASFKENMC VHDGKVPTFY ADYVNEVKRI 480
481 IQRNANLEFE AIWKGHSENK IPYTSLSNHL STEIVKLDHD IYNYEKLWAD VGFRNAVLRA 540
541 SIPKTLQAKI GLEKMLERIP ESYLRAIFST YLASRFVYQH VVSSDPFAFF DYISTEMKML 600
601 KDA
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| Detection Method: | |
| Confidence: | 121.0 |
| Match: | 1l1fA |
| Description: | Glutamate dehydrogenase |
Matching Structure (courtesy of the PDB): |
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