| Protein: | SPCC132.04c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1106 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC132.04c.
| Description | E-value | Query Range |
Subject Range |
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1114.0 | [0..43] | [1103..2] |
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1109.0 | [0..43] | [1103..2] |
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1042.0 | [0..46] | [1094..1] |
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1042.0 | [0..64] | [1104..21] |
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1039.0 | [0..41] | [1094..10] |
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1021.0 | [0..50] | [1104..53] |
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1008.0 | [0..50] | [1094..53] |
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1005.0 | [0..42] | [1104..36] |
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983.0 | [0..39] | [1103..3] |
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983.0 | [0..51] | [1100..38] |
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Region A: Residues: [1-87] |
1 11 21 31 41 51
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1 MYLTKQIPHY SRIHTTQLLT VVNHRTIPFK IRGSFSNCRR YSNFATVPLL ERPFKNKSKH 60
61 NTARASRPFS TQKMLLTKSH PPNMYKD
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| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.542 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.439 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.418 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.404 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.403 | a.77.1 | DEATH domain |
| View | Download | 0.247 | d.120.1 | Cytochrome b5 |
| View | Download | 0.241 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.226 | b.82.3 | cAMP-binding domain-like |
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Region A: Residues: [88-140] |
1 11 21 31 41 51
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1 SVFFGYRPIV FSGKQDQKSK VIQCLRTERK TIPDDLVEDE VDRFYNKLGL DDY
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.770 | N/A | N/A | a.4.7 | Ribosomal protein L11, C-terminal domain |
| View | Download | 0.679 | N/A | N/A | a.4.7 | Ribosomal protein L11, C-terminal domain |
| View | Download | 0.628 | N/A | N/A | a.4.7 | Ribosomal protein L11, C-terminal domain |
| View | Download | 0.592 | N/A | N/A | a.4.7 | Ribosomal protein L11, C-terminal domain |
| View | Download | 0.533 | N/A | N/A | a.4.7 | Ribosomal protein L11, C-terminal domain |
| View | Download | 0.419 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.419 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.359 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.357 | N/A | N/A | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.339 | N/A | N/A | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.333 | N/A | N/A | d.59.1 | Ribosomal protein L30p/L7e |
| View | Download | 0.319 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.308 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.247 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.232 | N/A | N/A | a.126.1 | Serum albumin-like |
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Region A: Residues: [141-243] |
1 11 21 31 41 51
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1 YFQMEPVSII ADHIEIIYAA KIAAHASHAK EELNIHVKNE NEDLAIYLDS SPVTQPELDQ 60
61 SSAVEESIST RYLDPFKLTD PTAYRVESFT SVTNIDRTST ENS
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.891 | d.52.8 | Description not found. |
| View | Download | 0.882 | d.58.19 | Bacterial exopeptidase dimerisation domain |
| View | Download | 0.850 | d.227.1 | OsmC-like |
| View | Download | 0.843 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.822 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.816 | d.58.12 | eEF-1beta-like |
| View | Download | 0.816 | d.58.12 | eEF-1beta-like |
| View | Download | 0.802 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.802 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.774 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.730 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.671 | d.52.6 | BolA-like |
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Region A: Residues: [244-398] |
1 11 21 31 41 51
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1 NIYTYFVTKC DFVDNPKKDA SPDVPTDIAS VSDKTFLEKA SDNTIEMYQD VMNSVLTRFG 60
61 PVVRLFDYQG RSEIRLVVGY RRGSIFQYFP SLSKLFRYYG LHSTRTYVEQ FSNGVTIISY 120
121 NFKPELFKNA AVTSINELFS QITREASLLY CLPST
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [399-503] |
1 11 21 31 41 51
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1 DFQPLFVSEK LSIQEVTYAH CVRIFCEHVM NKLGPEYSSL SAILDHSNNI HAEILETIKR 60
61 RLSTLAFTRT KIHDTIMQYP GLVHTLFEQF YLEHAINHNS TPHLH
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.721 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.600 | a.77.1 | DEATH domain |
| View | Download | 0.594 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.594 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.590 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.590 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.587 | a.64.1 | Saposin |
| View | Download | 0.587 | a.64.1 | Saposin |
| View | Download | 0.428 | a.3.1 | Cytochrome c |
| View | Download | 0.286 | a.130.1 | Chorismate mutase II |
| View | Download | 0.279 | d.26.1 | FKBP-like |
| View | Download | 0.213 | a.4.1 | Homeodomain-like |
| View | Download | 0.203 | c.47.1 | Thioredoxin-like |
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Region A: Residues: [504-1106] |
1 11 21 31 41 51
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1 RAKSATSLAD EASTYSITPM SATALMDLIQ KTCTNEEDVS VMEMFVKFNT HLLKTNFFQT 60
61 TKVALSFRFD PSFLDSTQYK DPLYAMIMSI GNEFRGFHLR FRDVARGGIR LIKSANPEAF 120
121 GLNARGLFDE NYNLAKTQML KNKDIPEGGA KGVILLGKDC QDKPELAFMK YIDSIIDLLI 180
181 VNKSQPLVDK LGKPEILFMG PDENTADLVN WATIHAHRRN APWWKSFFTG KKPTMGGIPH 240
241 DKYGMTSLSV RCYVEGIYKK LNITDPSKLT KVQTGGPDGD LGSNEIKLSN EKYIAVIDGS 300
301 GVLYDPAGLD RTELLRLADE RKTIDHFDAG KLSPEGYRVL VKDTNLKLPN GEIVRNGTIF 360
361 RNTAHLRYKA DTFVPCGGRP NAININNVEQ LIDDHGRPAF KYLVEGANLF ITQDAKSVLE 420
421 KAGVIVIRDA SANKGGVTSS SLEVLASLSF DDASFKENMC VHDGKVPTFY ADYVNEVKRI 480
481 IQRNANLEFE AIWKGHSENK IPYTSLSNHL STEIVKLDHD IYNYEKLWAD VGFRNAVLRA 540
541 SIPKTLQAKI GLEKMLERIP ESYLRAIFST YLASRFVYQH VVSSDPFAFF DYISTEMKML 600
601 KDA
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| Detection Method: | |
| Confidence: | 121.0 |
| Match: | 1l1fA |
| Description: | Glutamate dehydrogenase |
Matching Structure (courtesy of the PDB): |
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