YRC Public Data Repository - Protein Structure Prediction

Protein:	mcp4
Organism:	Schizosaccharomyces pombe
Length:	355 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

No multiple sequence alignment data found for mcp4.

Predicted Domain #1

Region A:
Residues: [1-262]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPCEDKCKR GLSLNFFEED GPSLRLNSDS LDFLARDFKV EGMSQDNFDQ KTKLYITEES  60
   61 LQKEVNIFLT KIYIRESERE PPQSHNSVFQ LLSKIRNSVP NVSAFRNNLS ILSKELSFFS 120
  121 FARHIHNRRL CWAEFIYCIR RGIKAIFKTT VQFLPTRLAK IFEKKASEVL KDNLLQTCNS 180
  181 KREGEVCDVK EPAVASSESS DCFNDMQELN NIVDLRDYSN SRFQQNRLLD RNLKGWIQGE 240
  241 SEKALKGRRT TKRNDKENYN YP

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [263-355]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFSNDNELLF SLATLIVENN PKKENIIPKY YLRYLQRLSR TEINKEIIEI EKLELEVVQF  60
   61 QMSIANLINT QVEVTNTIEE LGLRCRPLPN ENE