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View Structure Prediction Details

Protein: mcp4
Organism: Schizosaccharomyces pombe
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for mcp4.

Predicted Domain #1
Region A:
Residues: [1-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPCEDKCKR GLSLNFFEED GPSLRLNSDS LDFLARDFKV EGMSQDNFDQ KTKLYITEES  60
   61 LQKEVNIFLT KIYIRESERE PPQSHNSVFQ LLSKIRNSVP NVSAFRNNLS ILSKELSFFS 120
  121 FARHIHNRRL CWAEFIYCIR RGIKAIFKTT VQFLPTRLAK IFEKKASEVL KDNLLQTCNS 180
  181 KREGEVCDVK EPAVASSESS DCFNDMQELN NIVDLRDYSN SRFQQNRLLD RNLKGWIQGE 240
  241 SEKALKGRRT TKRNDKENYN YP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [263-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFSNDNELLF SLATLIVENN PKKENIIPKY YLRYLQRLSR TEINKEIIEI EKLELEVVQF  60
   61 QMSIANLINT QVEVTNTIEE LGLRCRPLPN ENE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.729 f.17.1 F1F0 ATP synthase subunit C
View Download 0.620 a.126.1 Serum albumin-like
View Download 0.620 a.126.1 Serum albumin-like
View Download 0.616 f.17.1 F1F0 ATP synthase subunit C
View Download 0.610 a.4.5 "Winged helix" DNA-binding domain
View Download 0.606 a.24.26 Description not found.
View Download 0.603 a.24.17 Group V grass pollen allergen
View Download 0.603 a.24.17 Group V grass pollen allergen
View Download 0.582 a.118.13 Arp2/3 complex 16 kDa subunit ARPC5


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle