YRC Public Data Repository - Protein Structure Prediction

Protein:	atg15
Organism:	Schizosaccharomyces pombe
Length:	424 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atg15.

Description	E-value	Query Range	Subject Range
gi\|39977149, gi\|... - gi\|39977149\|ref\|XP_369962.1\| hypothetical protein MG06477.4 [Magnaporthe grisea 70-15], gb\|EAA56506....	633.0	[0..30]	[418..59]
gi\|46111275, gi\|... - gi\|46111275\|ref\|XP_382695.1\| hypothetical protein FG02519.1 [Gibberella zeae PH-1], gi\|42545408\|gb\|E...	624.0	[0..29]	[418..66]
ATG15 - Lipase required for intravacuolar lysis of autophagic bodies and Cvt bodies; targeted to intravacuol... ATG15_YEAST - Putative lipase ATG15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATG15 PE=1 SV=2	606.0	[0..41]	[420..57]
ATG15_NEUCR - Putative lipase atg15 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 /... gi\|32411621, gi\|... - gi\|32411621\|ref\|XP_326291.1\| hypothetical protein [Neurospora crassa], gi\|28918417\|gb\|EAA28091.1\| hy...	602.0	[0..40]	[418..71]
ATG15_CHAGB - Putative lipase atg15 OS=Chaetomium globosum GN=atg15 PE=3 SV=1 ATG15_CHAGB - Putative lipase atg15 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /...	589.0	[0..30]	[418..28]
ATG15_PASFU - Putative lipase ATG15 OS=Passalora fulva GN=ATG15 PE=2 SV=1	579.0	[0..39]	[423..60]
gi\|3850137 - gi\|3850137\|emb\|CAA21938.1\| conserved hypothetical protein [Candida albicans]	576.0	[0..38]	[423..58]
ATG15_CANAL - Putative lipase ATG15 OS=Candida albicans GN=ATG15 PE=3 SV=1 ATG15_CANAL - Putative lipase ATG15 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ATG15 PE=3 SV=1	573.0	[0..38]	[423..58]
ATG15_ASPTN - Putative lipase atg15 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg15 PE=3 SV=1	548.0	[0..33]	[419..53]
ATG15_EMENI - Putative lipase atg15 OS=Emericella nidulans GN=atg15 PE=3 SV=1 gi\|49097192, gi\|... - gi\|67539498\|ref\|XP_663523.1\| hypothetical protein AN5919.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	547.0	[0..21]	[419..18]

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Predicted Domain #1

Region A:
Residues: [1-130]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLLFLRRF FFLFCFIIRI SCTGVFESVI KSSENVPDKV NVKLQHVFHY GLNEDSISYY  60
   61 RLDVAKKSVY AESESKLPLK MKKGYSVHLK DQSRDALTDY RYKSMKGIYS EANSPADLWE 120
  121 QEAIVIPDIT

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [131-317]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKETIYSLGK MSYNAYQKIP FDGDWLDLGP DWNITPPEGF GWEEDGLRGH VFSNDDNSTI  60
   61 IIAMKGTSIF GIGRGTSQKD RVNDNLLFSC CCARVSWAWS TVCGCYKNTY TCSQTCLEDE 120
  121 VQDDSRYYSA SLDIFYSVKE LYPDAQIWLT GHSLGGATAA LMGLSFGIPT VTFEAPGDRM 180
  181 AARRLHL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	3.69897
Match:	1dt3A
Description:	Triacylglycerol lipase
Matching Structure (courtesy of the PDB):

Predicted Domain #3

Region A:
Residues: [318-424]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMPPGLPDEE SLVWHFGHNA DPIYLGKCTG PTSLCWAGGY AMESTCHTGQ ECLYDVVKDK  60
   61 GWHLSITHHR MQTVLNDVID AYEKLPDCSH TPNCVDCYLW EFPDDDS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits