| Protein: | atg15 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 424 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atg15.
| Description | E-value | Query Range |
Subject Range |
|
|
633.0 | [0..30] | [418..59] |
|
|
624.0 | [0..29] | [418..66] |
|
|
606.0 | [0..41] | [420..57] |
|
|
602.0 | [0..40] | [418..71] |
|
|
589.0 | [0..30] | [418..28] |
|
|
579.0 | [0..39] | [423..60] |
|
|
576.0 | [0..38] | [423..58] |
|
|
573.0 | [0..38] | [423..58] |
|
|
548.0 | [0..33] | [419..53] |
|
|
547.0 | [0..21] | [419..18] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MSQLLFLRRF FFLFCFIIRI SCTGVFESVI KSSENVPDKV NVKLQHVFHY GLNEDSISYY 60
61 RLDVAKKSVY AESESKLPLK MKKGYSVHLK DQSRDALTDY RYKSMKGIYS EANSPADLWE 120
121 QEAIVIPDIT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.685 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.467 | a.74.1 | Cyclin-like |
| View | Download | 0.439 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.433 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.430 | b.1.1 | Immunoglobulin |
|
Region A: Residues: [131-317] |
1 11 21 31 41 51
| | | | | |
1 DKETIYSLGK MSYNAYQKIP FDGDWLDLGP DWNITPPEGF GWEEDGLRGH VFSNDDNSTI 60
61 IIAMKGTSIF GIGRGTSQKD RVNDNLLFSC CCARVSWAWS TVCGCYKNTY TCSQTCLEDE 120
121 VQDDSRYYSA SLDIFYSVKE LYPDAQIWLT GHSLGGATAA LMGLSFGIPT VTFEAPGDRM 180
181 AARRLHL
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1dt3A |
| Description: | Triacylglycerol lipase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [318-424] |
1 11 21 31 41 51
| | | | | |
1 PMPPGLPDEE SLVWHFGHNA DPIYLGKCTG PTSLCWAGGY AMESTCHTGQ ECLYDVVKDK 60
61 GWHLSITHHR MQTVLNDVID AYEKLPDCSH TPNCVDCYLW EFPDDDS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.581 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.727 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.621 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.516 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.514 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
