YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SPAC22A12.06c
Organism: Schizosaccharomyces pombe
Length: 429 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC22A12.06c.

Description E-value Query
Range
Subject
Range
gi|215704694, gi... - gi|50905845|ref|XP_464411.1| putative Cgi67 serine protease [Oryza sativa (japonica cultivar-group)]...
244.0 [0..24] [331..73]
gi|9802758, gi|7... - gi|9802758|gb|AAF99827.1|AC027134_9 Hypothetical protein [Arabidopsis thaliana], gi|79343655|ref|NP_...
215.0 [0..24] [337..60]

Back

Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSATKSKIL CIHGYAESGE LFSVKLRALR ERMADSVDFY FPTGPIELDK AKDELNGSGF  60
   61 DALSTVFSSS PASHRRGWWR INEYADTKQL EPTKAFEYLA SYIKEHGPFD GILGFSQGTN 120
  121 LAANLAALVT IPKYQEYFSQ PPFRFALFFS GYFRPLLMDG AVHATKLDLP TLHLLGKYDT 180
  181 VLSTETSTTL VRACKDAQVL FHPAAHQIPA PHAYVEPAAD FIDFFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.154902
Match: 1fj2A
Description: Acyl protein thioesterase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 1.75934962198703 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.09488027320166 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [227-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REDWPIISKH ISLIVPTKKV NTTSAQTSLN NVEHDLISKI MSRSFKGGIN VVVSDLQMFN  60
   61 EYKRIFGPKV LSLVVTDGQE PDTYSENVHY TPNFKGALAY LEAYQNSIGR IYVIGDKKLL 120
  121 TLGMLCRCTK RIIAITDAED KFISQSSAQQ VSGSLPFLEH SKEWLKAKSS QIRQWTGQSR 180
  181 LKHMSQDNSG EPVTMKLQMW ERL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle