| Protein: | SPCC1620.05 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 344 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1620.05.
| Description | E-value | Query Range |
Subject Range |
|
|
242.0 | [0..1] | [266..1] |
|
|
228.0 | [0..2] | [266..61] |
|
|
228.0 | [0..1] | [266..1] |
|
|
227.0 | [0..1] | [266..1] |
|
|
226.0 | [0..1] | [264..1] |
|
|
222.0 | [0..1] | [266..1] |
|
|
220.0 | [0..14] | [343..256] |
|
Region A: Residues: [1-279] |
1 11 21 31 41 51
| | | | | |
1 MHGILRVKLS EEQRKLKAEK ERAKIEEYRG LVSRFQEARK RKDYSEGNLK LTTELLDWNP 60
61 ETYSVWNYRR EILLNDVFPK ISLNEKQDLL DNELKYVLSK MKVFPKVYWI FNHRRWCLEN 120
121 APYPNWNYEM MITEKLLSAD ARNFHGWHYR RYVVSQIERA GNCSLAKKEM EYTTSAIATN 180
181 FSNFSALHNR TKLIETILNL EADPNSQKAL AKQILEQELD MIHQAVFTDP DDSSVWIYHR 240
241 WLMGHCNPNS MTPLISMITI EERIQYLQKE IELIQELHE
|
| Detection Method: |  |
| Confidence: | 57.0 |
| Match: | 1dceA |
| Description: | Rab geranylgeranyltransferase alpha-subunit, N-terminal domain; Rab geranylgeranyltransferase alpha-subunit, insert domain; Rab geranylgeranyltransferase alpha-subunit, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein prenyltransferase activity | 14.5503734940473 | bayes_pls_golite062009 |
| Rab geranylgeranyltransferase activity | 13.1624958019148 | bayes_pls_golite062009 |
| protein geranylgeranyltransferase activity | 13.1460127219249 | bayes_pls_golite062009 |
| prenyltransferase activity | 12.4552179391942 | bayes_pls_golite062009 |
| protein farnesyltransferase activity | 12.1496415778348 | bayes_pls_golite062009 |
| CAAX-protein geranylgeranyltransferase activity | 10.4593287273566 | bayes_pls_golite062009 |
| acetylcholine receptor regulator activity | 2.46174453725203 | bayes_pls_golite062009 |
| transferase activity | 1.86754243570948 | bayes_pls_golite062009 |
| binding | 1.29714843812125 | bayes_pls_golite062009 |
| catalytic activity | 0.874200184943744 | bayes_pls_golite062009 |
| protein binding | 0.478870166958436 | bayes_pls_golite062009 |
|
Region A: Residues: [280-344] |
1 11 21 31 41 51
| | | | | |
1 MEPENRWCCE SLVNYEALCK TLEKQKPTEA DIKRWTLLVD KMIKVDPQRR GRYRTLQEKI 60
61 NNLNK
|
| Detection Method: | |
| Confidence: | 7.30103 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
