| Protein: | gda1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 556 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gda1.
| Description | E-value | Query Range |
Subject Range |
|
|
541.0 | [0..54] | [554..32] |
|
|
516.0 | [0..87] | [554..7] |
|
|
507.0 | [0..87] | [554..7] |
|
|
501.0 | [0..111] | [554..91] |
|
|
501.0 | [0..83] | [554..67] |
|
|
499.0 | [0..66] | [554..42] |
|
|
495.0 | [0..110] | [554..92] |
|
|
494.0 | [0..34] | [554..10] |
|
|
492.0 | [0..87] | [554..7] |
|
|
490.0 | [0..65] | [554..41] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MTPTMKSIAR RKALLIALSI FAVTFILWNG FPGSSNRPLP SSNDEFHYED IELPSGYRSE 60
61 GEVVDLLNPK DELEEPLFSE EPLFPVTTSI PTKTAVSKPK IAPTSAAKDV TFSSSIDSDD 120
121 CSVAYDNSKP VRQYVLMID
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [140-317] |
1 11 21 31 41 51
| | | | | |
1 AGSTGSRVHV YQFNNCNPSP KLEEEFFKMI EPGLSSFAGD PEGAAASLDP LLDYAMENVP 60
61 EEYRRCSPIA VKATAGLRLT GESEAKAILK SVRQHLENDY PFPIVKDGVS ILEGSMEGIY 120
121 AWITINYLLG TLGGKATHST VAVMDLGGAS TQLVFEPRFA SDGESLVDGD HKYVLDYN
|
| Detection Method: | |
| Confidence: | 21.09691 |
| Match: | 2j4rA |
| Description: | No description for 2j4rA was found. |
| Term | Confidence | Notes |
| substrate-specific transporter activity | 2.59764970470908 | bayes_pls_golite062009 |
| binding | 1.68922494775364 | bayes_pls_golite062009 |
| kinase activity | 1.66508642127964 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.57418195923629 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.32149522077117 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 1.2847464984536 | bayes_pls_golite062009 |
| protein binding | 0.956664772028256 | bayes_pls_golite062009 |
| hexokinase activity | 0.805517970873735 | bayes_pls_golite062009 |
| glucokinase activity | 0.528131951721586 | bayes_pls_golite062009 |
| peptide binding | 0.52147941626058 | bayes_pls_golite062009 |
| catalytic activity | 0.296484721581333 | bayes_pls_golite062009 |
| protein kinase activity | 0.264382945335796 | bayes_pls_golite062009 |
| nucleic acid binding | 0.118568675002995 | bayes_pls_golite062009 |
| unfolded protein binding | 0.0304569608189402 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0247789146030069 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.00248169742356286 | bayes_pls_golite062009 |
|
Region A: Residues: [318-454] |
1 11 21 31 41 51
| | | | | |
1 GEQYELYQHS HLGYGLKEAR KLIHKFVLNN AEALKESLEL LGDSTSIIHP CLHLNASLTH 60
61 PDSKSEASEV VFVGPSLAHL SLQCRGIAEK ALYKDKNCPV RPCSFNGVHQ PKFTETFTDS 120
121 PIYLISYFYD RMISLGM
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.598 | 0.286 | Golgi apparatus | d.15.1 | Ubiquitin-like |
| View | Download | 0.457 | 0.108 | Golgi apparatus | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.400 | 0.066 | protein amino acid glycosylation | d.26.1 | FKBP-like |
| View | Download | 0.412 | 0.009 | protein amino acid glycosylation | d.15.11 | Doublecortin (DC) |
| View | Download | 0.416 | N/A | N/A | f.17.2 | Cytochrome c oxidase subunit II-like, transmembrane region |
|
Region A: Residues: [455-556] |
1 11 21 31 41 51
| | | | | |
1 PSTFTIEDMK YLANSVCSGP TYWQDAFSLT DALKELKEEP EWCLDLNYMI SLLSVGYEIP 60
61 NNRQLHTAKK IDNKELGWCL GASLSMLSEQ NNGWNCNVKE EI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.593 | 0.372 | protein amino acid glycosylation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.611 | 0.086 | calcium ion binding | a.65.1 | Annexin |
| View | Download | 0.740 | 0.028 | protein amino acid glycosylation | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.700 | N/A | N/A | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.560 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
