YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC4D7.02c
Organism:	Schizosaccharomyces pombe
Length:	319 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC4D7.02c.

Description	E-value	Query Range	Subject Range
gi\|25487769 - pir\|\|D84112 glycerophosphoryl diester phosphodiesterase glpQ [imported] - Bacillus halodurans (strai... gi\|10176324, gi\|... - gi\|15616262\|ref\|NP_244567.1\| glycerophosphoryl diester phosphodiesterase [Bacillus halodurans C-125]...	227.0	[0..5]	[274..13]
gi\|223488779, gi... - gi\|254479407\|ref\|ZP_05092739.1\| Glycerophosphoryl diester phosphodiesterase family protein [Carboxyd... gi\|20807473 - gi\|20807473\|ref\|NP_622644.1\| Glycerophosphoryl diester phosphodiesterase [Thermoanaerobacter tengcon... gi\|20807473, gi\|... - gi\|20807473\|ref\|NP_622644.1\| glycerophosphoryl diester phosphodiesterase [Thermoanaerobacter tengcon...	222.0	[0..31]	[282..2]
gi\|221312349 - gi\|221312349\|ref\|ZP_03594154.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp... GLPQ_BACSU - Glycerophosphoryl diester phosphodiesterase OS=Bacillus subtilis (strain 168) GN=glpQ PE=3 SV=1 GLPQ_BACSU - Glycerophosphoryl diester phosphodiesterase OS=Bacillus subtilis GN=glpQ PE=3 SV=1 gi\|221321546 - gi\|221321546\|ref\|ZP_03602840.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp... gi\|221317282 - gi\|221317282\|ref\|ZP_03598576.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp...	221.0	[0..7]	[283..6]
gi\|18144079, gi\|... - gi\|18309403\|ref\|NP_561337.1\| glycerophosphodiester phosphodiesterase [Clostridium perfringens str. 1...	219.0	[0..29]	[284..1]
gi\|110800595, gi... - gi\|110800595\|ref\|YP_694881.1\| putative glycerophosphoryl diester phosphodiesterase [Clostridium perf...	218.0	[0..29]	[284..1]
gi\|22778520, gi\|... - gi\|23100288\|ref\|NP_693755.1\| glycerophosphodiester phosphodiesterase [Oceanobacillus iheyensis HTE83...	216.0	[0..1]	[278..11]
gi\|110801784, gi... - gi\|110801784\|ref\|YP_697749.1\| glycerophosphoryl diester phosphodiesterase [Clostridium perfringens S...	216.0	[0..29]	[286..1]
gi\|51893596, gi\|... - gi\|51893596\|ref\|YP_076287.1\| glycerophosphodiester phosphodiesterase [Symbiobacterium thermophilum I...	215.0	[0..32]	[277..2]
gi\|242257355, gi... - gi\|242257355\|ref\|ZP_04802223.1\| Glycerophosphodiester phosphodiesterase [Thermoanaerobacter sp. X513... gi\|241904084, gi... - gi\|241904084\|ref\|ZP_04788795.1\| Glycerophosphodiester phosphodiesterase [Thermoanaerobacter brockii ... gi\|114844053, gi... - gi\|167040045\|ref\|YP_001663030.1\| glycerophosphodiester phosphodiesterase [Thermoanaerobacter sp. X51... gi\|166856211, gi... - gi\|76797455\|ref\|ZP_00779769.1\| Glycerophosphodiester phosphodiesterase [Thermoanaerobacter ethanolic...	214.0	[0..31]	[282..2]
gi\|27886770, gi\|... - gi\|34763559\|ref\|ZP_00144495.1\| Glycerophosphoryl diester phosphodiesterase [Fusobacterium nucleatum ...	214.0	[0..32]	[280..4]

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Predicted Domain #1

Region A:
Residues: [1-319]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFNYSIANT VDDAAQSIAE NTSSLATFSK PPLVIAHRGK CLTYVYRYKA KYPENTILAF  60
   61 QQAVKAGADC VETDVRLTKD EVVCILHDRN LNRVFGVDVD VRDLDYELDN GHFRTIQEPH 120
  121 EPLPTYEQFL HELTKHPGVN LLVDIKPVND LLIIPRMVDA MLRVNSDLDF WKDKVSFCLW 180
  181 SHRFIPACDR YAPSIPLYHI GFNFAYAERH FVMHPRVKGV SMAVALFLLP HSQDFVDLVH 240
  241 AQGKQVFAWT LNTPSSIYLA LIRGCDGLLS DDPVMARALS QGPIVTKSWH YFHYSEWLHM 300
  301 IYGFLRAQFV FFLLRTFVL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.69897
Match:	1o1zA
Description:	Hypothetical protein TM1621
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
phosphatidylglycerol phospholipase C activity	4.4148776764724	bayes_pls_golite062009
glycerophosphodiester phosphodiesterase activity	4.27697417361287	bayes_pls_golite062009
phosphoric diester hydrolase activity	3.6633363681844	bayes_pls_golite062009
phospholipase activity	3.3535603060637	bayes_pls_golite062009
phosphoric ester hydrolase activity	2.89024275707278	bayes_pls_golite062009
phospholipase C activity	2.81479108775786	bayes_pls_golite062009
inositol or phosphatidylinositol phosphodiesterase activity	2.13368269358874	bayes_pls_golite062009
phosphoinositide phospholipase C activity	2.13368269358874	bayes_pls_golite062009
hydrolase activity	1.41001330359992	bayes_pls_golite062009
lipase activity	1.30779031242608	bayes_pls_golite062009
catalytic activity	1.22328099675039	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	1.21202479488854	bayes_pls_golite062009
binding	0.105617039092967	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: