| Protein: | mtr4 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1117 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mtr4.
| Description | E-value | Query Range |
Subject Range |
|
|
767.0 | [0..92] | [1117..38] |
|
|
766.0 | [0..92] | [1117..38] |
|
|
765.0 | [0..92] | [1117..36] |
|
|
764.0 | [0..92] | [1117..38] |
|
|
763.0 | [0..96] | [1117..42] |
|
|
763.0 | [0..92] | [1117..38] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MFGGELDDAF GVFEGKVPKS LKEESKNSQN SQNSQKIKRT LTDKNASNQE QGTKKLESSV 60
61 GEQESATKRA KIENLKDNQD LIPNNDVNGI HINNSAV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [98-179] |
1 11 21 31 41 51
| | | | | |
1 ADTKHKPKIG DIAADDISNE VSIKNEGDTI PEATVADSFE QEASLQVAGK VGMTEAKSST 60
61 EEVVELRHQV RHQVSIPPNY DY
|
| Detection Method: | |
| Confidence: | 20.69897 |
| Match: | 1gm5A |
| Description: | RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [180-722] |
1 11 21 31 41 51
| | | | | |
1 VPISKHKSPI PPARTYPFTL DPFQAVSIAC IERQESVLVS AHTSAGKTVV AEYAVAQSLR 60
61 DKQRVIYTSP IKALSNQKYR ELLAEFGDVG LMTGDVTINP DATCLVMTTE ILRSMLYRGS 120
121 EVMREVAWVI FDEIHYMRDK ERGVVWEETI ILLPDKSHFV FLSATIPNAM QFAEWITKIH 180
181 RQPCHVVYTD FRPTPLQHYL FPSGSDGIHL VVDEKSNFRE ENFQRAMSAL MEKQGDDPAA 240
241 MATKGNAKKG KTGKGGVKGP SDIYKIVKMI MVKNYNPVIV FSFSKRECEA LALQMSKLDM 300
301 NDQTERDLVT TIFNNAVNQL SEKDRELPQI EHILPLLRRG IGIHHSGLLP ILKEVIEILF 360
361 QEGLLKVLFA TETFSIGLNM PAKTVVFTNV RKFDGKTFRW ISGGEYIQMS GRAGRRGLDD 420
421 RGIVILMIDE KMDPPVAKSM LKGEADRLDS AFHLSYNMIL NLLRVEGISP EFMLERCFFQ 480
481 FQNSLEVPKL EAKLEESQQH YDSFTILDER PLEEYHTLKT QLERYRTDVR TVVNHPNFCL 540
541 SFL
|
| Detection Method: | |
| Confidence: | 45.30103 |
| Match: | 1oywA |
| Description: | Structure of the RecQ Catalytic Core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [723-795] |
1 11 21 31 41 51
| | | | | |
1 QGGRLVRVKV GNEDFDWGVV VNVSKRPLPK GQSNEYLPQE SYIVHTLVMV ASDTGPLRIR 60
61 SGHLPEVHPP AAE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.335 | b.1.18 | E set domains |
| View | Download | 0.332 | b.1.18 | E set domains |
| View | Download | 0.314 | b.1.18 | E set domains |
| View | Download | 0.302 | b.1.18 | E set domains |
| View | Download | 0.282 | b.41.1 | Photosynthetic reaction centre, H-chain, cytoplasmic domain |
| View | Download | 0.278 | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.262 | d.52.10 | Description not found. |
| View | Download | 0.231 | d.54.1 | Enolase N-terminal domain-like |
|
Region A: Residues: [796-941] |
1 11 21 31 41 51
| | | | | |
1 DKGKFEVVPF LLSSLDGIAH IRVFLPNDLK SQGQKLTVGK ALSEVKRRFP EGITLLDPVE 60
61 NMNIKEPTFI KLMKKVNILE SRLLSNPLHN FSELEEKYAE YLRKLALLEE VKDLKKKLSK 120
121 ARSIMQLDEL NSRKRVLRRL GFTTSD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.584 | a.24.29 | Description not found. |
| View | Download | 0.576 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.507 | d.110.4 | SNARE-like |
| View | Download | 0.476 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.438 | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.426 | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.409 | d.110.4 | SNARE-like |
| View | Download | 0.378 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.365 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.364 | a.62.1 | Hepatitis B viral capsid (hbcag) |
|
Region A: Residues: [942-1117] |
1 11 21 31 41 51
| | | | | |
1 DVIEVKGRVA CEISSGDGLL LTELIFNGMF NDLTPEQCAA LLSCLVFQEK SEVENQRMKE 60
61 ELAGPLKILQ EMARRIAKVS KESKQELNEE EYVNSFKPSL MEVVYAWAHG ASFAQICKMT 120
121 DVYEGSLIRM FRRLEELIRQ MVDAAKVIGN TSLQQKMEDT IACIHRDIVF SASLYL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
