| Protein: | SPAC17C9.12 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 319 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC17C9.12.
| Description | E-value | Query Range |
Subject Range |
|
|
219.0 | [0..1] | [252..8] |
|
|
219.0 | [0..1] | [252..8] |
|
|
213.0 | [0..1] | [252..15] |
|
|
211.0 | [0..1] | [252..8] |
|
|
210.0 | [0..1] | [252..8] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MALECDSTIV FPRPLTRLVK CDLELRNTAP YPIGFKVKTT APKQYCVRPN GGRIEANSAV 60
61 SVEVILQPLD HEPAPGTKCR DKFLVQSTEL KPELQGMDIA DIWTQVSKAN ISERKIRCVY 120
121 SEGPS
|
| Detection Method: |  |
| Confidence: | 32.045757 |
| Match: | 1grwA |
| Description: | Major sperm protein, MSP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.38752281572098 | bayes_pls_golite062009 |
| binding | 1.31179124589449 | bayes_pls_golite062009 |
|
Region A: Residues: [126-223] |
1 11 21 31 41 51
| | | | | |
1 TANAHANAHH QPAQTTTTSI PTSATDNYTT VNGNVNQSYS KGIDGTALPS THANPVAAPS 60
61 TATTQHTQLP KTSAVSHQKP HEAPSTAVKA PTATVAEN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [224-319] |
1 11 21 31 41 51
| | | | | |
1 EPYPKPQSVP TTTSPNNENN ALRSTANVIN NTRQSTATSP SMFAGNSGNQ IGLARVSSSF 60
61 GRPTSGAKVV PQIHNTVTVQ TAFLLAIICF LIGLLF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.900 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
