| Protein: | SPBC2F12.05c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1310 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC2F12.05c.
| Description | E-value | Query Range |
Subject Range |
|
|
625.0 | [0..381] | [1300..1] |
|
|
614.0 | [0..391] | [1300..32] |
|
|
614.0 | [0..365] | [1300..9] |
|
|
611.0 | [0..391] | [1300..32] |
|
|
608.0 | [0..391] | [1300..32] |
|
Region A: Residues: [1-467] |
1 11 21 31 41 51
| | | | | |
1 MEHPSPDSVS STSSSDHKKA ELSDSLKQLQ LLQAFQAGDI KQVDNLLHNK SKDECTHALF 60
61 ISIQCANVQM VKHILSVFDV DVNAYDKNKN TPLHLAAMAG RQDIVEALLL HPDINYNLVN 120
121 ANNKKAYQVA TSPQLMDFMK GFYVTYTKET AREFKKAFKE RNLESMDYLM RHNEFNDAID 180
181 LNEVDIKTGQ TYLHVATKAK DAELVKWLLD NGADPYRRDK FGKLPTDYTK DENMRSLLRS 240
241 YSGNRDSSSA PAVPQHMSGY LKKWTNYKSG YKLRWFTLNN GVLSYYKNQD DASSACRGSI 300
301 NLKLARLVHD PKQPTVFQVI GKGSVRYSVK ANSPVEAKKW IAAISSAIEN DEEANKPNVT 360
361 ADNASFGTHD LAPAAHKFTQ SNASGNSGWD DNESDIDRAQ LPSRENFEFN VNIAKLQVET 420
421 LHKLIDSAMQ TEKVKKDPSL SQVFDGISNS FNTLHKTVLE MLDLQRQ
|
| Detection Method: |  |
| Confidence: | 66.69897 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.74306164317133 | bayes_pls_golite062009 |
| protein binding | 1.6716587413544 | bayes_pls_golite062009 |
|
Region A: Residues: [468-694] |
1 11 21 31 41 51
| | | | | |
1 AEHYYKRKLD NAKAINALWA ENLKTVVEEQ DQIEERYHRS EAHRRRTKRA FRRLAASLKK 60
61 RPSDKDNKLH IHYDDGAMSS TSYSTDFTDD EEETNTKDEF FDVDAHDNNH ANKAEPSQTA 120
121 NNVHEIREPS FSSEHKPQPS LKTTTDVSSP ETKQNIADIR KTTLTDQTEE FTERRDNNGS 180
181 IPSKQPSDEQ HLGKESLPSQ QSTVSNHHRK ESIPSKQPTE GQHARQE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [695-917] |
1 11 21 31 41 51
| | | | | |
1 SLPSQQTTET KHLRKESTPS KQPTEGQHTR QESLPSQQTT ETKHLRKESI PSKQPTEGQH 60
61 ARQESLPSQQ TTETKHLRKE SIPSKQPSGG QQLRQESLPS QQSSESKQST QHQQPVEVQK 120
121 SIQSDVSAPK AKEVSEKPVS HQAKPSNASQ LSRNTDDTQA KEAPKEASIP DNASTASTKV 180
181 SNDSHLKPDA DKKSVSSELT HASKPSLDEK TMQLAKQIAV SFH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [918-1310] |
1 11 21 31 41 51
| | | | | |
1 GYEAPTRENL DVNDDRPKIS LWGILKGMIG KDMTKMTLPV SFNEPTSLLQ RVAEDMEYTE 60
61 LLDQASHNKD PYQRILYVAA FAASEYASTL NRVAKPFNPL LGETYEFCHP QRGFRFIVEQ 120
121 VSHHPPVGAA YSESANWKYY GESSVKSKFY GKSFDISPLG TWFLELRHPS GEVELYTWKK 180
181 VTSSVVGIIL GSPSVDNYGQ MHIVNHSSGI NCVLDFKPRG WRGTNAHEVK GSVQSTDDTP 240
241 KWMVNGHWND KIFGQQPNGN KILLWQNHER PPRPFNLTPF AISLNALTPQ LKPWLPPTDT 300
301 RLRPDQRAME NGQYDLAASE KNRLEEKQRK KRRMREQGEM PPWSPRWFSA AKHPVTGEDY 360
361 WQFNNEYWKI REEAGEAHLA GKEFEWPNVD DIF
|
| Detection Method: | |
| Confidence: | 80.69897 |
| Match: | 1zhtA |
| Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| sterol binding | 3.12877992228795 | bayes_pls_golite062009 |
| steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
| binding | 1.67154210149282 | bayes_pls_golite062009 |
| lipid binding | 1.46539100663772 | bayes_pls_golite062009 |
| oxysterol binding | 1.1738554488982 | bayes_pls_golite062009 |
| 0.35288515581255 | bayes_pls_golite062009 | |
| phospholipid binding | 0.0867097353003303 | bayes_pls_golite062009 |
