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View Structure Prediction Details

Protein: SPAC4H3.13
Organism: Schizosaccharomyces pombe
Length: 88 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC4H3.13.

Description E-value Query
Range
Subject
Range
gi|109132848 - gi|109132848|ref|XP_001089237.1| PREDICTED: similar to ESO3 protein [Macaca mulatta]
133.0 [0..8] [87..132]
LAGE3 - L antigen family, member 3
gi|190690245, gi... - gi|190691619|gb|ACE87584.1| L antigen family, member 3 protein [synthetic construct], gi|190690245|g...
123.0 [0..8] [87..60]
gi|157821989, gi... - gi|34881763|ref|XP_215227.2| PREDICTED: similar to Eso3 protein [Rattus norvegicus], gi|157821989|re...
122.0 [0..9] [87..66]
LAGE3_MOUSE - EKC/KEOPS complex subunit Lage3 OS=Mus musculus GN=Lage3 PE=2 SV=1
120.0 [0..9] [87..66]
gi|114690669 - gi|114690669|ref|XP_521343.2| PREDICTED: similar to L antigen family, member 3 [Pan troglodytes]
111.0 [0..12] [87..5]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEMIVLPHK VTVKVPLASR VDAERCLQVL APDRELKEEL VQRNLFVDDN YLVVNYSCSS  60
   61 ARMTRVTVNS LFENLYLIID TMHELSSL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 37.60206
Match: PF09341.1
Description: No description for PF09341.1 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.972 N/A N/A d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.940 N/A N/A d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.919 N/A N/A d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.913 N/A N/A d.58.51 Description not found.
View Download 0.875 N/A N/A d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.874 N/A N/A d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.822 N/A N/A d.58.4 Dimeric alpha+beta barrel
View Download 0.749 N/A N/A d.58.49 YajQ-like
View Download 0.744 N/A N/A d.58.20 NAD-binding domain of HMG-CoA reductase
View Download 0.736 N/A N/A d.52.3 Prokaryotic type KH domain (KH-domain type II)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle