| Protein: | ppc89 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 783 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ppc89.
| Description | E-value | Query Range |
Subject Range |
|
|
300.0 | [0..2] | [781..1273] |
|
|
299.0 | [0..2] | [781..1172] |
|
|
299.0 | [0..2] | [781..1170] |
|
|
299.0 | [0..2] | [781..1172] |
|
|
299.0 | [0..2] | [781..1171] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MPSQFNDNFV ATDDDVGTMA RVGMALDREL NGDSFQDNLN FQPRSGKRED FEPFFQDTPN 60
61 TKSLSKHFHD FTMNASLETL PSVEKPRGRN M
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.200 | a.60.9 | lambda integrase-like, N-terminal domain |
|
Region A: Residues: [92-475] |
1 11 21 31 41 51
| | | | | |
1 NAFEETSWNR FRKNGSLFPL SSPPISEPDL RPQALNETPD YRNRFLGAFK KQGVLDDHGN 60
61 LKLDASPSFL KKPAEYTPLA NRQNQNLAFD SPTEALPPKP TTPWRRNGFR SKTTPNLNSG 120
121 KETPSSYKAS ARLMEQLGLN HSEPSVDFNN QTSYRLPNLT NLSSLIRDDT IDENGNAKEH 180
181 DRLPELNTIP VASTDEQLFN AHQLLEKKFE ILKRERNECN AKIDELQDKL ELLTDAYNRE 240
241 KRRARSLEER MSKEMLTKLG ESNVDDGMAA SRYDTVKREK ERLSEHLKSL QEQYEHIQSV 300
301 YKNVLLDRES YIMRLGNKIS ENNELLNENR VLKEKLQTYL DKKESNVTSK IKSTAENSSK 360
361 PLSMNEADER KDGLNNLLFE NKSG
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [476-635] |
1 11 21 31 41 51
| | | | | |
1 ANTKEMSNGT ETAKENCSPQ QDSTSPTSGY QDLVKELAKE IEMRKSLELK LKLSQSNKAG 60
61 PVKHRKRRPK SKRRITGKVV FDSPNVASGV ESDEGSEEIS LDSEYSDILS DDGDFEKEKQ 120
121 ATLPRRRSSS SMKGNKLAED SYLNEAGFDW NQGTFHNGSE
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [636-783] |
1 11 21 31 41 51
| | | | | |
1 FGTTGVPDEP NEEELPKHVL KQVEHIINES AAHGVGKCNA CHARQEDLIR GEQKVSHSNC 60
61 LYADQTLRPS QPPSEALKTV VNQLTNELME LKKRYEKLSD RYNSLTPGYH KHKRQEIKNK 120
121 LIKLIECMES KSDQIYLLYD VNVGKDFS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
