| Protein: | SPAC3H8.02 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 444 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC3H8.02.
| Description | E-value | Query Range |
Subject Range |
|
|
370.0 | [0..4] | [435..198] |
|
|
370.0 | [0..4] | [436..182] |
|
|
345.0 | [0..4] | [426..8] |
|
|
338.0 | [0..1] | [426..1] |
|
|
337.0 | [0..4] | [443..162] |
|
|
323.0 | [0..4] | [425..6] |
|
|
321.0 | [0..4] | [441..7] |
|
|
320.0 | [0..5] | [441..162] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MPEGAGRPWN LTELEEEKLK TMWSYLFKLF GITLLERTES WYTVKTHLSD DSSSSSSHRL 60
61 SSVSYAKSRT RLELT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [76-344] |
1 11 21 31 41 51
| | | | | |
1 SSSHGSDTRS FNDKTKNVHL ERVEKIASEW DPEGLRVCFW DAVNCDDPDG LLLRFLRARK 60
61 WNVEAALEMF MKTVHWRSRE MNVGEIVCNA DHLDKDDDFV RQLRIGKCFI FGEDKHNRPV 120
121 CYIRARLHKV GDVSPESVER LTVWVMETAR LILKPPIETA TVVFDMTDFS MSNMDYGPLK 180
181 FMIKCFEAHY PECLGECIVH KAPWLFQGVW SIIKSWLDPV VVSKVKFTRN YRDLQQYINP 240
241 DNILKEFGGP NPWRYTYPEP CQNEAEALK
|
| Detection Method: | |
| Confidence: | 46.39794 |
| Match: | 1auaA |
| Description: | PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phospholipid transporter activity | 4.82372291869245 | bayes_pls_golite062009 |
| lipid transporter activity | 3.44932625048477 | bayes_pls_golite062009 |
| phosphatidylinositol transporter activity | 3.08477039249457 | bayes_pls_golite062009 |
| binding | 2.50711590439337 | bayes_pls_golite062009 |
| transcription regulator activity | 1.96100267092334 | bayes_pls_golite062009 |
| retinoid binding | 1.4508809653482 | bayes_pls_golite062009 |
| isoprenoid binding | 1.32450443851017 | bayes_pls_golite062009 |
| vitamin binding | 1.07146133708197 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.658164745879483 | bayes_pls_golite062009 |
| protein binding | 0.385179389448981 | bayes_pls_golite062009 |
| transcription activator activity | 0.0412266116598821 | bayes_pls_golite062009 |
|
Region A: Residues: [345-444] |
1 11 21 31 41 51
| | | | | |
1 NVEARKSLRA KKDAIAKQYE EVTMDWILNN GDMAEVKQKR RKLASQLIDA YWNLDKYIRA 60
61 RSVYDRMGLI APQTSHTLLL SQPTNGDVKE SMVEVTSSAT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
