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View Structure Prediction Details

Protein: SPAC18G6.10
Organism: Schizosaccharomyces pombe
Length: 688 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC18G6.10.

Description E-value Query
Range
Subject
Range
SRC1_YEAST - Inner nuclear membrane protein SRC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRC1...
SRC1 - Inner nuclear membrane protein that functions in regulation of subtelomeric genes and is linked to T...
429.0 [0..16] [678..137]
gi|39944762, gi|... - gi|39944762|ref|XP_361918.1| hypothetical protein MG04363.4 [Magnaporthe grisea 70-15], gb|EAA50604....
429.0 [0..3] [668..7]
gi|46105492, gi|... - gi|46105492|ref|XP_380550.1| hypothetical protein FG00374.1 [Gibberella zeae PH-1], gi|42546791|gb|E...
391.0 [0..1] [669..4]
gi|85111619 - gi|85111619|ref|XP_964023.1| hypothetical protein NCU09319 [Neurospora crassa OR74A]
gi|32423147, gi|... - gi|32423147|ref|XP_332011.1| hypothetical protein [Neurospora crassa], gi|28925782|gb|EAA34787.1| pr...
388.0 [0..3] [668..8]
gi|46096360, gi|... - gi|71003349|ref|XP_756355.1| hypothetical protein UM00208.1 [Ustilago maydis 521], ref|XP_397823.1| ...
377.0 [0..2] [667..5]
gi|40740029, gi|... - gi|67526905|ref|XP_661514.1| hypothetical protein AN3910.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
367.0 [0..3] [667..6]
gi|45190906, gi|... - gi|45190906|ref|NP_985160.1| AER303Wp [Ashbya gossypii ATCC 10895], gi|44983948|gb|AAS52984.1| AER30...
gi|44983948 - gi|44983948|gb|AAS52984.1| AER303Wp [Ashbya gossypii ATCC 10895]
358.0 [0..8] [670..253]
mug61 - Sad1 interacting factor
MUG61_SCHPO - Meiotically up-regulated gene 61 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=m...
351.0 [0..16] [667..84]
gi|114191859, gi... - gi|115398774|ref|XP_001214976.1| conserved hypothetical protein [Aspergillus terreus NIH2624], gi|11...
345.0 [0..3] [667..6]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNWEDPNFE LRNLRVIDLK KILHESGVSF PVNARKIEYI RMVDRIRKNK LSSGPQHLLS  60
   61 HLQKEENSNT SKASSSEDEI APKYLYPSSP SKSTKKPHNE TEPLLSPQFI DKPSNIETPV 120
  121 KIESPHVSQN NTFQSYSELS PNVETSLTMK TPPAHASTPK FRSHKSHRVA VPM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [174-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFMDSSALHT SPAFSERLKL LSSSNNFSPQ LRSPKISHRL QTSATSSPLQ HKRPFTNVPE  60
   61 RVSRDIEFAP LDSARPSESS SPYSEVDSAE EDDELFQNYV LQQTRKESKL WSFIKKVFHD 120
  121 IKYANYRLLH NLRAFPGISA I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [315-527]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSYLVHIFM ILLGVVAAIF LALLREKMFT AGFCDSGASG SSASILGISF PSLCRTCPPN  60
   61 AICPSPNYVE CKPGYVLYEP WYSSLGFWPS KYCVSDTSRE ESVNIFREEC LSVLRSWNAI 120
  121 LHCSNNSSDL LERNMSYNAH PYVADNLNIS SDHISFPSKP FALGLLHDTL LERKSPTLGL 180
  181 EMFEDLFKAS LAVLSETNEV VMDSKLICYD SWA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [528-688]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIPLRCRLKQ QLIKFVWRNK VFLFGILALS GVIFKLINFF RTRSIVAKYL PSASRFCVES  60
   61 LKRQKANYQM SRSQEPVIPL IEMHDILFHG NGPLEQIHMT KATARTLWEA IVERVEQVGS 120
  121 VRTRESEVDG EWTRVWEWVG TNTLDFQTDR SFINTTSPLR E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.69897
Match: 2ch0A
Description: No description for 2ch0A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle