YRC Public Data Repository - Protein Structure Prediction

Protein:	fio1
Organism:	Schizosaccharomyces pombe
Length:	622 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fio1.

Description	E-value	Query Range	Subject Range
gi\|27525867 - gi\|27525867\|emb\|CAD21518.1\| putative multicopperoxidase [Claviceps purpurea]	534.0	[0..15]	[612..13]
gi\|46432551, gi\|... - gi\|68489847\|ref\|XP_711263.1\| potential multicopper ferro-O2-oxidoreductase [Candida albicans SC5314]... orf19.11687, orf... - FET3 CGDID:CAL0000091 Assembly 19, Contig19-10201 (30178, 32037) CDS, translated using codon table 1...	533.0	[0..3]	[603..2]
gi\|46121561, gi\|... - gi\|46121561\|ref\|XP_385335.1\| hypothetical protein FG05159.1 [Gibberella zeae PH-1], gi\|42551600\|gb\|E...	520.0	[0..1]	[581..1]
gi\|22506643 - gi\|22506643\|dbj\|BAC10629.1\| hypothetical multicopper oxidase protein [Candida albicans]	516.0	[0..3]	[593..2]
gi\|83771474 - gi\|83771474\|dbj\|BAE61606.1\| unnamed protein product [Aspergillus oryzae] gi\|169776545 - gi\|169776545\|ref\|XP_001822739.1\| hypothetical protein [Aspergillus oryzae RIB40]	505.0	[0..1]	[596..3]

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Predicted Domain #1

Region A:
Residues: [1-622]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKFFSFPIL GLLLTCVRFV VAKERLFEWN VTDVYDVDPD GSGNSRWVIG VNNKWPIDPL  60
   61 VVDYGDQVII KMTNSLANNR TTSLHSHGLF QKFTPYMDGV PQSTQCEIPP GATFYYNYTA 120
  121 LQNGTYWVHS HDMSQYPDGL RTPFIINALE EPYDYDEEYI ISMTDWYYTP FNILVPDEFK 180
  181 TWKNPTGAEP VPDTGLFNDT ANATFAMEPG KTYRLRFINI GAFNNYDVMI EDHNMTIIEV 240
  241 DGEYTEPQEV SSIHLTVAQR YSVLVTAKNS TDRNYAITAY MDESLFDTIP DNYNPNVTAW 300
  301 LSYNSDASYD LGPDIDEIDS YDDAELNPLY SWDVTESNHS INIWFDFFTL GDGANYAEIN 360
  361 DSSYVFPKVP SIMIANSTNV DGYNLEPVTY GPYTNAYIFE YGDVVDVIID NHDTGKHPFH 420
  421 LHGHTFQVLE RGEENAGLYS DQESHTYYDN PMRRDTVEIE PGSFIVIRFI ADNPGAWVIH 480
  481 CHIEWHMESG LLATFIEAPE MIPSISSPDF VKEQCMLDGV PTIGNGAGNY KNISDLSGAP 540
  541 SPPGEMPAGW TSKAIGTMAA CVISACIGMG SIIFYGASIH PVPTEELDEN DDLQEAALEN 600
  601 AAMFLDTDKA VEKVVEGKDE IK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	111.0
Match:	1zpuA
Description:	Crystal Structure of Fet3p, a Multicopper Oxidase that Functions in Iron Import
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits