| Protein: | urb2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1318 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for urb2.
| Description | E-value | Query Range |
Subject Range |
|
|
2154.0 | [0..1] | [1318..1] |
|
|
662.0 | [0..729] | [1317..582] |
|
|
317.0 | [0..1066] | [1318..1221] |
|
|
314.0 | [0..1068] | [1317..1233] |
|
|
314.0 | [0..1068] | [1317..1211] |
|
|
302.0 | [0..1070] | [1317..1222] |
|
|
295.0 | [0..1069] | [1317..516] |
|
|
294.0 | [0..1064] | [1317..1120] |
|
|
282.0 | [0..1060] | [1317..1119] |
|
|
279.0 | [0..1074] | [1318..1156] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MSLQTLTKRI RDKNGSREDQ IDLANKLFRG EVDVYFPNKE EFIINFLLDR LKENSNLTCV 60
61 NIGYWQLFLN IWKSDKLSGS FRVSAIRRQS LYPIILNAFE YLIKEFKKDV FLKISDVFVC 120
121 VYSNLNILYI SRSFPDQISL LFSRYCYLIA SKIDDLLDSH PNEVFKETLI CVIQSAVHSQ 180
181 ASSTKAQTQF LHQTLGSILA LLCKTQK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [208-332] |
1 11 21 31 41 51
| | | | | |
1 GDPYFSFLNA VLMKCVLTQH TLDVLLLTKK DSSMTLCSLL NAISFEPINL KAIPLFFIIC 60
61 ADSINFHLSS VEKSISQQKA SELMYKLFSE HIAFLLSLKN LPEEATLDCM LSICQVFEND 120
121 NLHRG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [333-493] |
1 11 21 31 41 51
| | | | | |
1 HSDEYTFAML EQLLELSVKT LRQNTCWSTS WEMLSSLLAI DFDVLLPHSK ILWECIKSVS 60
61 HQDDIHALKF LKRWVRASAK ARILDSFCID WHLNVQTMSE RSILTNRDFI TSFSAVAEVS 120
121 LSQISIKKLV TWLMSSESIM SENSNRFVVY YSLCKSLKRE S
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [494-715] |
1 11 21 31 41 51
| | | | | |
1 YPAHLVPNFE LFTRSIFNAS LKNFNILDER SQALLCMCQI SHVQFFSSDM SISASVGMKT 60
61 LFEDLMAEKS RGLSSTVWSL QLLLCYLEQC LRLNTLHEDT TFPMRVVNYA LEYSSKALDK 120
121 FAENSHLILL DMVDVGKPDL VLTLLCRWLH MVHLYSSRTS ITSWIYSIAS KFYFIDSLNL 180
181 ETKDSVLESN WERFISSTET YELDSIRDSL IDCLIRLLCY SS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [716-783] |
1 11 21 31 41 51
| | | | | |
1 NNAIDPVSAP GNLDFDNSAE LCSSLTRFTP KNIDFVLKSL IHIPIHSITK NQRTRLLNLL 60
61 IIHEKLLS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.663 | a.101.1 | Uteroglobin-like |
| View | Download | 0.643 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.643 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.597 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.597 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.552 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.540 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.540 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
|
Region A: Residues: [784-883] |
1 11 21 31 41 51
| | | | | |
1 DKDNSAHISL RKIIYTLMKT PCSSGFYRDP KIIIDLMQFG KTDLSFHKVH VLIMRSWIQH 60
61 LDEGNKSEVI LKLLQLILAD FRELPLETIT LIFNALVDSL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.974 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.896 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.891 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.818 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.818 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.812 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.781 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.701 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.668 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.649 | a.39.1 | EF-hand |
| View | Download | 0.490 | d.326.1 | Description not found. |
| View | Download | 0.462 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.431 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.279 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.234 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
|
Region A: Residues: [884-1062] |
1 11 21 31 41 51
| | | | | |
1 PTSKHIKNSN DILSSVFTIN DMLIDEMTAY LSKKESLCSG TFSCLLACCN SVLRTQNLTS 60
61 ESLNKLHILK VGIEEKAISL KLNELPFLEN WILFQCLLSF GGDDFLKVVA YMVYYRRTVG 120
121 EMSFRVSDFE LALSRLSTND ADYAILNILN LLTSNECDEF DYSVLMKVVG VFANYSDCF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1063-1159] |
1 11 21 31 41 51
| | | | | |
1 QRNRHLVHMV LLCCTHVFYN QTLKPATLID SALDVFLCFV QKTSKFISLD SFNTILTALS 60
61 TILNLKELEC EPKDHANLIL KIIQILNGLL FNHRSYM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.987 | a.24.28 | Description not found. |
| View | Download | 0.976 | a.24.28 | Description not found. |
| View | Download | 0.967 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.950 | a.8.4 | Description not found. |
| View | Download | 0.947 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.927 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.914 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.902 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.745 | a.130.1 | Chorismate mutase II |
| View | Download | 0.601 | a.159.4 | Description not found. |
| View | Download | 0.425 | a.74.1 | Cyclin-like |
| View | Download | 0.390 | a.1.1 | Globin-like |
| View | Download | 0.363 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [1160-1318] |
1 11 21 31 41 51
| | | | | |
1 SGRFHVFYSI LKSLLYSMVQ HDSEMKKIKG IALMNFYKPK KVPIHVVQSF CRLLTTWMNP 60
61 NLMHDSNKKN SSLTDAERLF VKATTKHFVF LLTDFMSAQT VYQIDIQVKE LLTNCFYNVY 120
121 ENLSNHEKQM ALVAMNAPSK SLYQKFVNDY LIFAKWNEA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
