| Protein: | tsc1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 899 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tsc1.
| Description | E-value | Query Range |
Subject Range |
|
|
341.0 | [0..7] | [897..1870] |
|
|
323.0 | [0..7] | [897..817] |
|
|
320.0 | [0..8] | [897..871] |
|
|
319.0 | [0..7] | [897..870] |
|
Region A: Residues: [1-198] |
1 11 21 31 41 51
| | | | | |
1 MPLQSLVKAL WNVLHEEESE GYPDLTELIA EVESYQQRYP KQNPTNSQKI RHILDEIYEK 60
61 TPFNNTRRRI LWLAVLKTVI PLLILDRQAV GEWWDQIFFP FLNSPTQLKP VFSDLKSILF 120
121 YILIFHDEDE WGGDLRRECA EETITRLVDL YVSKAIENLG DVESQEQRNQ TIECLVNVLV 180
181 HYGIQRPKEL SSCFCHHF
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.575 | 0.895 | GTPase activator activity | a.24.11 | Bacterial GAP domain |
|
Region A: Residues: [199-620] |
1 11 21 31 41 51
| | | | | |
1 LNPPTRIPIL SVMVEVIRRQ GPRLYEIPQT GFYDLVLKCA EFDTSPILLS YALSFILMIL 60
61 SHICNSLDDS LYRLFCIYLR FSMIDPTSGF PSSTASGNWE VFHDFMSTYA STTTSQTDSS 120
121 YNDVHDIVGS SQPDYLESLD YSQLFSILYA LYPINFLEFL RDPKLYASKH NFQIRYSFNQ 180
181 ELLSTKSDGL LGRHLAHSNF LKYTAETELT DKSRWTRLDS IAVVALCNSL NAVGIAESVM 240
241 DPFGGKLPTT YEETSSATGL LAYPNESHDI ASEPFSISWP QNPSISGSVH SATTFDKAQL 300
301 SNTEDSYDNI SHGTSYSEGV SSIHMVKGER GSNNLELTSE SLSSTNDTIR RLQRDLLFLQ 360
361 NELRFEKFVR QQHLQNIGKL HREHILDMAV ESERQKLLLT NKRYKAQIEL LNSEIDKHRS 420
421 ES
|
| Detection Method: | |
| Confidence: | 29.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [621-899] |
1 11 21 31 41 51
| | | | | |
1 QAALNRRVKW ENDFNNKIKA LREEKKAWKS EESELKSSIE SLISQLESIR NSQIDIAFSK 60
61 NQLELKLQLY ETKLKEYEQH LSCVNISKKQ VSSSSDTSFG NTKMDSSMIL SNSEAVSDEQ 120
121 ERELIESEKH RMKLESENLH LQANIELLKK DLEAINVVYE AKIFDLEKRL SSEANAPELH 180
181 NPVNLNYDAQ LSKISEIKEN YDELLTRYRE LEGKFLESQA EVEELKNFQK PLVDTGSSIH 240
241 SSPGLQQSKF IIRNDSLHPK VGPPRRQSTD TSRSTFRQY
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
