| Protein: | sld3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 668 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sld3.
| Description | E-value | Query Range |
Subject Range |
|
|
581.0 | [0..1] | [668..1] |
|
|
368.0 | [0..8] | [610..760] |
|
|
267.0 | [0..8] | [666..54] |
|
|
241.0 | [0..117] | [650..1383] |
|
|
241.0 | [0..11] | [631..42] |
|
|
226.0 | [0..8] | [659..77] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MNNDHASKKS FCIKAPSNWE KSYLEVWPLV TVPRQCICLR WCISKEYHEF TCSSLQFIVI 60
61 RPAGTSVLLG RVKSSKANQL VGIEHVEGSR YALIFLSEKL DFKSLKVIAN HQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.708 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.703 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.702 | b.61.2 | Metalloprotease inhibitor |
| View | Download | 0.693 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.677 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.676 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.668 | b.61.2 | Metalloprotease inhibitor |
| View | Download | 0.598 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.596 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.543 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.363 | g.28.1 | Thyroglobulin type-1 domain |
| View | Download | 0.283 | b.7.1 | C2 domain (Calcium/lipid-binding domain, CaLB) |
| View | Download | 0.271 | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
| View | Download | 0.255 | b.128.1 | Hypothetical protein YojF |
|
Region A: Residues: [113-181] |
1 11 21 31 41 51
| | | | | |
1 LTKSSKSLSN VSNKPLGDQL FRSNSLMSPS LLKKELHRIQ SDASQANERE SQAPHSFVTH 60
61 DLISSSKDG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.794 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.691 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.626 | a.243.1 | Description not found. |
| View | Download | 0.606 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.552 | a.112.1 | Description not found. |
| View | Download | 0.536 | a.112.1 | Description not found. |
| View | Download | 0.517 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.511 | a.272.1 | Description not found. |
| View | Download | 0.499 | a.112.1 | Description not found. |
|
Region A: Residues: [182-363] |
1 11 21 31 41 51
| | | | | |
1 NSLTHEFAND SVTEMVQDYT PSCSRDVKSL LDHLYNSYFY QLLMTKTPVV FYVKQMVGKT 60
61 RQLAVEVHNH VEEKALVDEL LKFLDNLKSV DDRKSRLLQC FESHLNYKAW HLEFENEAHQ 120
121 YEIKGYRLWL QNILNRENCQ ITKLDFEREF SQLKLKDLLD SRDSGKRKSR KKNAKTLNPF 180
181 ET
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [364-592] |
1 11 21 31 41 51
| | | | | |
1 AQLKLEFTFD GLCIRRTIEQ NATERSEDLL LKFCKETIVP YYSSKFPRIT RNLLEKCNGL 60
61 DLLPERSHKH RHSAPPRSKL ISSKSEAGRA LPGNTSGASI SNTSSPHSEA SISKDYEILK 120
121 RRRSNSGVHS LTRSDSSFNG FERDTRRRSS DIARIKNREI NLPSSSLSKQ RNSMHDISTN 180
181 FPRRNLSFTE KLTMASLQGQ SEESVQPKTT SSLSRSKTLS ILEGSVSKR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [593-668] |
1 11 21 31 41 51
| | | | | |
1 SEPSMDSILV QATPRKSSSV ITELPDTPIK MNSLDKASAC TVENHIVTES PAHKSNKAQL 60
61 FVCVPTTPVK KKSASP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.293 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.260 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.249 | b.3.5 | B repeat unit of collagen binding surface protein (cna) |
| View | Download | 0.223 | a.64.1 | Saposin |
| View | Download | 0.209 | a.20.1 | PGBD-like |
