YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC2F7.10
Organism:	Schizosaccharomyces pombe
Length:	642 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC2F7.10.

Description	E-value	Query Range	Subject Range
AKR1_ASPFU - Palmitoyltransferase akr1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC ... AKR1_ASPFU - Palmitoyltransferase akr1 OS=Aspergillus fumigatus GN=akr1 PE=3 SV=2	458.0	[0..4]	[639..67]
AKR1_ASPOR - Palmitoyltransferase akr1 OS=Aspergillus oryzae GN=akr1 PE=3 SV=2 AKR1_ASPOR - Palmitoyltransferase akr1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=akr1 PE=3 SV=2	454.0	[0..4]	[638..67]
AKR1_EMENI - Palmitoyltransferase akr1 OS=Emericella nidulans GN=akr1 PE=3 SV=2 AKR1_EMENI - Palmitoyltransferase akr1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 19...	448.0	[0..4]	[639..68]
AKR1_NEUCR - Palmitoyltransferase AKR1 OS=Neurospora crassa GN=akr-1 PE=3 SV=2 AKR1_NEUCR - Palmitoyltransferase akr1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 12...	447.0	[0..4]	[638..47]
gi\|115386046, gi... - gi\|115386046\|ref\|XP_001209564.1\| palmitoyltransferase akr1 [Aspergillus terreus NIH2624], gi\|1141905...	438.0	[0..4]	[638..62]
AKR1_GIBZE - Palmitoyltransferase AKR1 OS=Gibberella zeae GN=AKR1 PE=3 SV=1 AKR1_GIBZE - Palmitoyltransferase AKR1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) ...	432.0	[0..4]	[639..32]
gi\|38106851, gi\|... - gi\|39972161\|ref\|XP_367471.1\| hypothetical protein MGG_07382 [Magnaporthe grisea 70-15], gb\|EAA53105....	421.0	[0..4]	[638..43]
gi\|90305959, gi\|... - gi\|90305959\|gb\|EAS35590.1\| hypothetical protein CIMG_00944 [Coccidioides immitis RS], gi\|119193134\|r...	416.0	[0..4]	[639..64]
AKR1_SACBA - Palmitoyltransferase AKR1 OS=Saccharomyces bayanus GN=AKR1 PE=3 SV=2 AKR1_SACU7 - Palmitoyltransferase AKR1 OS=Saccharomyces uvarum (strain ATCC 76518 / CBS 7001 / CLIB 283 / NBRC 10...	409.0	[0..1]	[631..73]

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Predicted Domain #1

Region A:
Residues: [1-377]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLFLAASQ GELDTVKNLI SSEKIDVNAT DEGGATALHW AALNQQIPIC KFLLEHGADV  60
   61 NAIGGDLQAA PIHWAAKRGS VKTVHYLVQH GADPLLKDKQ GFNCLHLAVH AASPLLVVYL 120
  121 LHLDISVDLR DDQQHTPLMW ASYHGNEPIT NCLLRWGADV LATDEDKMTP LHWSIVGGNL 180
  181 KCMKLILKEG GIPCTAVTAN LSGQLKTPWA LASELRVSHL FKQALISNGL KVKETSEEPE 240
  241 KWVVVPSKFQ FSQKTFIIFC FLSSFIITGV FFFIMSICPM VISLIIAPLW IYFTFKYITT 300
  301 CIHANIDIVH FYLETPFLAG IFSSIFFWVW CHSLLYIVPK TLPIKPLSSL LFVLISFTCI 360
  361 GLYVRTAFQN PGYVDKI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	73.221849
Match:	1n11A
Description:	Ankyrin-R
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
protein binding	2.69918165732603	bayes_pls_golite062009
binding	2.17983095277661	bayes_pls_golite062009
transporter activity	1.19000052859754	bayes_pls_golite062009
transmembrane transporter activity	1.02570255606772	bayes_pls_golite062009
signal transducer activity	0.789486768149117	bayes_pls_golite062009
molecular transducer activity	0.789486768149117	bayes_pls_golite062009
substrate-specific transporter activity	0.581121752453591	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.428839878681413	bayes_pls_golite062009
hydrolase activity	0.37087528745606	bayes_pls_golite062009
transcription regulator activity	0.304692936026767	bayes_pls_golite062009
ion transmembrane transporter activity	0.240863793118641	bayes_pls_golite062009
nucleic acid binding	0.171334135216535	bayes_pls_golite062009

Predicted Domain #2

Region A:
Residues: [378-432]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAVVQRREEI SKLLDKDLFN QSHYCLKCFQ VKPPRSYHCG ACKRCINRYD HHCPW

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.18
Match:	2cklB
Description:	No description for 2cklB was found.

Predicted Domain #3

Region A:
Residues: [433-642]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGNCVGARNH RTFLLFVFTL STLIPIYFYV AFYYLQNIPI QKKYESYRCL FISGTICQWS  60
   61 LKDMFVLVAS LTLFVNWCWV VVLAFTQICQ VAHNVTTAEF RLFKRYGTLV PPTKQNSSPK 120
  121 NGHGIHGSFL RTVCGILGLD QCILLIRESN CFVRCFPSRA ELGSQNSTSL SRNLSTVNPY 180
  181 DEGSIIKNCK TFWKQNFLND GRQDEATRHV

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: