| Protein: | pol4 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 506 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pol4.
| Description | E-value | Query Range |
Subject Range |
|
|
532.0 | [0..4] | [504..52] |
|
|
530.0 | [0..4] | [504..41] |
|
|
529.0 | [0..4] | [504..41] |
|
|
528.0 | [0..4] | [504..41] |
|
|
521.0 | [0..4] | [504..40] |
|
|
515.0 | [0..4] | [504..40] |
|
|
504.0 | [0..4] | [504..60] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MKILASSTNY VLHNRLSNSQ YEDARSKIVN FGGEFTNDAA KADYIFVNYS QINRVRRELR 60
61 TIGTPLETCV SCKLIVKIDW LNEPKESLTP GNPYVIWHRK PEMKVGSPYT PSTRPASHTE 120
121 APNDFENHET PNTENNNEVK SIDNVDQEGS VYPTTKEYPY VLEIPRYACQ RKTPL
|
| Detection Method: |  |
| Confidence: | 16.30103 |
| Match: | 2dunA |
| Description: | No description for 2dunA was found. |
|
Region A: Residues: [176-506] |
1 11 21 31 41 51
| | | | | |
1 KCVNQAFVNA LSVLKTCREV NGESVRTRAY GMAIATIKAF PLPIDSAEQL EKMPGCGPKI 60
61 VHLWKEFAST GTLKEAEEFQ KDPASKILLL FYNIFGVGAS HAAEWYQKGW RTIEQVRKHK 120
121 DSFTKQIKVG LEFYEDFCKT VTIEEATEIY ETIVSRMPDG IKIQSCLVGG FRRGKPVGAD 180
181 VDMVLSPSHT HSTKHLVDVL LRILDEEFQF RLISVQEHSC GGKKGYVMLA VILSNSSKIN 240
241 RRVDIIVVPP AYIGSAVLGW SGGIFFLRDL KLYANSHLGL SYDSFEIINL KTGKDICPDE 300
301 FNEWKDPVEA EKDIFRYFSL EYIEPKFRNT G
|
| Detection Method: | |
| Confidence: | 113.0 |
| Match: | 1jmsA |
| Description: | Terminal deoxynucleotidyl transferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA-directed DNA polymerase activity | 5.14301767080098 | bayes_pls_golite062009 |
| DNA polymerase activity | 5.09523809908438 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 2.75404349131504 | bayes_pls_golite062009 |
| catalytic activity | 0.60409960326459 | bayes_pls_golite062009 |
