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View Structure Prediction Details

Protein: gmh2
Organism: Schizosaccharomyces pombe
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gmh2.

Description E-value Query
Range
Subject
Range
GMH3_SCHPO - Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh3 ...
gmh3 - alpha-1,2-galactosyltransferase Gmh3
347.0 [0..10] [345..9]
gi|207346534 - gi|207346534|gb|EDZ73006.1| YDR245Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190404806 - gi|190404806|gb|EDV08073.1| galactosyltransferase [Saccharomyces cerevisiae RM11-1a]
MNN10 - Subunit of a Golgi mannosyltransferase complex also containing Anp1p, Mnn9p, Mnn11p, and Hoc1p that ...
MNN10_YEAST - Probable alpha-1,6-mannosyltransferase MNN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...
331.0 [0..16] [346..53]
gi|39975379, gi|... - gi|39975379|ref|XP_369080.1| hypothetical protein MGG_00164 [Magnaporthe grisea 70-15], gb|EAA48506....
296.0 [0..83] [344..151]
gi|59802932 - gi|59802932|gb|AAX07671.1| alpha-1,2-galactosyltransferase-like protein [Magnaporthe grisea]
293.0 [0..10] [341..34]
gi|40644059 - gi|40644059|emb|CAE00652.1| golgi mannosyltransferase complex subunit [Kluyveromyces lactis]
289.0 [0..99] [346..59]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALMLSRIPR RFFFLFLTVG LIAGAFLYSL IYFVDVDLVS KVNQLYDQQI APMLSDAIGT  60
   61 PSVNHSFELA PLDSHLVATS TT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FHEASYESEP QQNPASQNIV LLLVSDGHTS YNNGANTFEE AIQNRVDYST KQNYNFEYVN  60
   61 VTGLPIPAVW SKMPAVLQTM KKYPKAEWIW LLDQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 2p6wA
Description: No description for 2p6wA was found.

Predicted Domain #3
Region A:
Residues: [177-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAIITNTHLS LQDSFLKPEN LQKTLITNTI LTKRPINANG DLRYTPSNYS LKDIENLMVI  60
   61 ISQDHNGLNA GSILFRNSPA TALFLDIWTD PVVAECAKAN NEQDMLGYLI SKHSQLASLV 120
  121 GLIPQRKINA FHEGPENMEW QKGDLVIHFA GCWVENRCDE LWQKFYALID 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.8
Match: 2p6wA
Description: No description for 2p6wA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle