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View Structure Prediction Details

Protein: gmh2
Organism: Schizosaccharomyces pombe
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gmh2.

Description E-value Query
Range
Subject
Range
GMH3_SCHPO - Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh3 ...
gmh3 - alpha-1,2-galactosyltransferase Gmh3
347.0 [0..10] [345..9]
gi|207346534 - gi|207346534|gb|EDZ73006.1| YDR245Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190404806 - gi|190404806|gb|EDV08073.1| galactosyltransferase [Saccharomyces cerevisiae RM11-1a]
MNN10 - Subunit of a Golgi mannosyltransferase complex also containing Anp1p, Mnn9p, Mnn11p, and Hoc1p that ...
MNN10_YEAST - Probable alpha-1,6-mannosyltransferase MNN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...
331.0 [0..16] [346..53]
gi|39975379, gi|... - gi|39975379|ref|XP_369080.1| hypothetical protein MGG_00164 [Magnaporthe grisea 70-15], gb|EAA48506....
296.0 [0..83] [344..151]
gi|59802932 - gi|59802932|gb|AAX07671.1| alpha-1,2-galactosyltransferase-like protein [Magnaporthe grisea]
293.0 [0..10] [341..34]
gi|40644059 - gi|40644059|emb|CAE00652.1| golgi mannosyltransferase complex subunit [Kluyveromyces lactis]
289.0 [0..99] [346..59]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALMLSRIPR RFFFLFLTVG LIAGAFLYSL IYFVDVDLVS KVNQLYDQQI APMLSDAIGT  60
   61 PSVNHSFELA PLDSHLVATS TT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FHEASYESEP QQNPASQNIV LLLVSDGHTS YNNGANTFEE AIQNRVDYST KQNYNFEYVN  60
   61 VTGLPIPAVW SKMPAVLQTM KKYPKAEWIW LLDQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 2p6wA
Description: No description for 2p6wA was found.

Predicted Domain #3
Region A:
Residues: [177-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAIITNTHLS LQDSFLKPEN LQKTLITNTI LTKRPINANG DLRYTPSNYS LKDIENLMVI  60
   61 ISQDHNGLNA GSILFRNSPA TALFLDIWTD PVVAECAKAN NEQDMLGYLI SKHSQLASLV 120
  121 GLIPQRKINA FHEGPENMEW QKGDLVIHFA GCWVENRCDE LWQKFYALID 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.8
Match: 2p6wA
Description: No description for 2p6wA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle