YRC Public Data Repository - Protein Structure Prediction

Protein:	tyr1
Organism:	Schizosaccharomyces pombe
Length:	431 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tyr1.

Description	E-value	Query Range	Subject Range
gi\|159129452 - gi\|159129452\|gb\|EDP54566.1\| prephenate dehydrogenase [Aspergillus fumigatus A1163] gi\|66853016, gi\|... - gi\|71001394\|ref\|XP_755378.1\| prephenate dehydrogenase [Aspergillus fumigatus Af293], gi\|66853016\|gb\|...	382.0	[0..2]	[427..5]
gi\|169783482 - gi\|169783482\|ref\|XP_001826203.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83774947 - gi\|83774947\|dbj\|BAE65070.1\| unnamed protein product [Aspergillus oryzae] gi\|238493283, gi... - gi\|238493283\|ref\|XP_002377878.1\| prephenate dehydrogenase [Aspergillus flavus NRRL3357], gi\|22069637...	381.0	[0..7]	[429..10]
gi\|1749634, gi\|1... - gi\|1749634\|dbj\|BAA13874.1\| unnamed protein product [Schizosaccharomyces pombe], gi\|11359262\|pir\|\|T43...	371.0	[0..32]	[430..2]
gi\|90303694, gi\|... - gi\|90303694\|gb\|EAS33325.1\| hypothetical protein CIMG_04349 [Coccidioides immitis RS], gi\|119188603\|r... gi\|240111546 - gi\|240111546\|gb\|EER29699.1\| prephenate dehydrogenase, putative [Coccidioides posadasii C735 delta SO...	369.0	[0..2]	[430..6]
gi\|68466390, gi\|... - gi\|68466390\|ref\|XP_722677.1\| hypothetical protein CaO19.4605 [Candida albicans SC5314], gi\|68466097\|... orf19.4605, orf1... - TYR1 CGDID:CAL0003587 Assembly 19, Contig19-10212 (82547, 81228) CDS, reverse complemented, translat...	367.0	[0..1]	[430..9]
gi\|115384690, gi... - gi\|115384690\|ref\|XP_001208892.1\| prephenate dehydrogenase [Aspergillus terreus NIH2624], gi\|11419658...	349.0	[0..11]	[426..3]
gi\|32403882, gi\|... - gi\|32403882\|ref\|XP_322554.1\| hypothetical protein [Neurospora crassa], gi\|28917864\|gb\|EAA27551.1\| pr... gi\|85081784 - gi\|85081784\|ref\|XP_956787.1\| prephenate dehydrogenase [Neurospora crassa OR74A]	349.0	[0..6]	[430..14]
gi\|49658011, gi\|... - gi\|50427457\|ref\|XP_462341.1\| hypothetical protein DEHA0G19591g [Debaryomyces hansenii CBS767], gi\|49... gi\|49658011\|emb\|... - unnamed protein product [Debaryomyces hansenii CBS767]	348.0	[0..1]	[430..12]
TYR1_YEAST - Prephenate dehydrogenase [NADP(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TYR1 ... TYR1 - Prephenate dehydrogenase involved in tyrosine biosynthesis, expression is dependent on phenylalanine...	347.0	[0..2]	[428..11]
gi\|45201315, gi\|... - gi\|45201315\|ref\|NP_986885.1\| AGR219Wp [Ashbya gossypii ATCC 10895], gi\|44986169\|gb\|AAS54709.1\| AGR21... gi\|44986169 - gi\|44986169\|gb\|AAS54709.1\| AGR219Wp [Ashbya gossypii ATCC 10895]	345.0	[0..5]	[428..14]

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Predicted Domain #1

Region A:
Residues: [1-431]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKETFQVGII GFGDMGRLYA EYISKAGWRV NVCDRPENYE SIQATYGNGG YTVLKDGFQV  60
   61 SRTSDYILYS VEAEHIDKVV ALYGPATKVG AIVGGQTSCK APEMNAFEKY LPEDVDIISC 120
  121 HSMHGPKVNP KSQPLVIIRH RASDEHFEIV NEILSCFKSS VVYLSAKEHD RITADTQAVT 180
  181 HAAFLTMGLA WHANNQYPWE INRWCGGIEN IKMNLSMRIY SSKWHVYAGL AILNPEAQRQ 240
  241 IQQYASSVTE LFKLAISGKA KEYEDRIRNA GKFVFGENMD RNSSGLLLSD ELLDQYSISN 300
  301 IPKDESKRNS HLSILAIVDS WSKLGIHPQN HMICSTPLFR LWVGVSEYVF RHPGLLDSCI 360
  361 YTATKHNDFS PDDLEFVVAV RSWSECVAAK DFTTYKKRFL ETQEYFRPRF EEATRVGNAM 420
  421 ISKLLENLQK M

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	26.69897
Match:	2q3eA
Description:	No description for 2q3eA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits