| Protein: | brf1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 500 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for brf1.
| Description | E-value | Query Range |
Subject Range |
|
|
383.0 | [0..6] | [494..1] |
|
|
383.0 | [0..6] | [494..1] |
|
|
382.0 | [0..6] | [494..1] |
|
|
361.0 | [0..10] | [494..3] |
|
|
350.0 | [0..6] | [494..1] |
|
|
341.0 | [0..71] | [494..209] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MLCFQLFAMG CPNCGSTTFE SDTASGNTYC TQCGVVVEQD AIVSEVTFGE ASTGAAVVQG 60
61 SLVSND
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [67-282] |
1 11 21 31 41 51
| | | | | |
1 QTHARTFGGP YRNQGSVESR ELTIANGRRR ISALAIALKL NERHIEAAVR YFTLAINNNF 60
61 IKGRRSQYVV ASCLYIVCRI SKTSHMLIDF SDILQINVFK LGSTFLKLCR VLRPNLPLLD 120
121 PSLYISRFAS LLEFGPETHR VANDAIRLVA RMNRDWMQIG RRPAGICGAC LLIAARMNNF 180
181 RRSVREVVHV VKVADITIQK RLDEFKLTES GDLSIA
|
| Detection Method: | |
| Confidence: | 51.0 |
| Match: | 2b9rA |
| Description: | No description for 2b9rA was found. |
|
Region A: Residues: [283-368] |
1 11 21 31 41 51
| | | | | |
1 DFRNIWLEGQ SDPPSFTKNQ KFQQYGAQKV SNIDHTQEYM SPIKRTPDFD GNEVKSEELS 60
61 QTVKVESQET PVHLKADERE IRKEVT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.375 | 0.054 | transcription initiation from RNA polymerase III promoter | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.476 | 0.011 | transcription initiation from RNA polymerase III promoter | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.424 | 0.010 | transcription initiation from RNA polymerase III promoter | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.417 | 0.010 | transcription initiation from RNA polymerase III promoter | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.397 | N/A | N/A | a.60.11 | Hypothetical protein YjbJ |
|
Region A: Residues: [369-500] |
1 11 21 31 41 51
| | | | | |
1 ETLKGDELRK ISLQVNVKFS EEEVTLEDVD DDEIEDILLD KDEILTKTQV WMELNKDYLA 60
61 EEEAKNLKLQ EDLKKGIVRQ PRKRRRYRPR DSTSDGIADT AAESAKEMMQ QRAFSKKINY 120
121 EALDMLFDEE QS
|
| Detection Method: | |
| Confidence: | 11.045757 |
| Match: | 1ngmB |
| Description: | TBP-binding domain of the transcription factor IIIb Brf1 subunit |
Matching Structure (courtesy of the PDB): |
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