Protein: | tfa2 |
Organism: | Schizosaccharomyces pombe |
Length: | 285 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tfa2.
Description | E-value | Query Range |
Subject Range |
|
376.0 | [0..1] | [285..1] |
|
315.0 | [0..1] | [284..1] |
|
308.0 | [0..1] | [282..1] |
|
300.0 | [0..2] | [284..91] |
|
299.0 | [0..1] | [284..1] |
|
297.0 | [0..1] | [284..1] |
|
295.0 | [0..2] | [284..3] |
|
290.0 | [0..2] | [282..51] |
Region A: Residues: [1-153] |
1 11 21 31 41 51 | | | | | | 1 MSSLSDQLSS FKKKVANQPI YAKPQPRQPA SPTPTAYLNS NDGHSSAASS PGSYSLKKKR 60 61 SKTSLVYSQP ADSGVGTHYL SQLHYAVEYL KERNEPKTAE EIASYLSTPL TPMLLNLLKK 120 121 NNRIYYDERN ETFTFKPLHN IRSGAGLLAY LDS |
Detection Method: | |
Confidence: | 18.0 |
Match: | 1d8jA |
Description: | The central core domain of TFIIE beta |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [154-285] |
1 11 21 31 41 51 | | | | | | 1 QKTHVGMSIK ELRDGWPNVT VELEELEKQG EVLLLRTRKD GVPKMVWRND KSCDCHVDKE 60 61 FQQVWHEIPI PPTLDLASEL GKYGLKPTSV DPSTVKRAGH NQTPKQKKPK TRRGKITNTH 120 121 LNILRDYSSM KP |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.284 | d.54.1 | Enolase N-terminal domain-like |
View | Download | 0.246 | d.93.1 | SH2 domain |
View | Download | 0.236 | a.95.1 | Influenza virus matrix protein M1 |
View | Download | 0.233 | a.95.1 | Influenza virus matrix protein M1 |
View | Download | 0.226 | d.54.1 | Enolase N-terminal domain-like |
View | Download | 0.222 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
View | Download | 0.209 | a.36.1 | Signal peptide-binding domain |
View | Download | 0.207 | a.36.1 | Signal peptide-binding domain |