| Protein: | ste6 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 911 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ste6.
| Description | E-value | Query Range |
Subject Range |
|
|
496.0 | [0..260] | [905..638] |
|
|
494.0 | [0..287] | [905..579] |
|
|
491.0 | [0..287] | [905..394] |
|
|
490.0 | [0..260] | [905..176] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MRFQTTAISD YENSSNPSFL KFSAGDTIIV IEVLEDGWCD GICSEKRGWF PTSCIDSSKI 60
61 QNFFSSFHSS NEKDPNAQCC APFHVEAHLQ DSAWFEKHGV QAINSI
|
| Detection Method: |  |
| Confidence: | 4.51 |
| Match: | 1uffA |
| Description: | Solution structure of the first SH3 domain of human intersectin2 (KIAA1256) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.01939163574954 | bayes_pls_golite062009 |
| protein binding | 1.71199213513011 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.169020668544027 | bayes_pls_golite062009 |
|
Region A: Residues: [107-258] |
1 11 21 31 41 51
| | | | | |
1 PSSEEFLRKN LQNDIHHLVK GILTTAAAVS QSIKKEGTQV IVFGIETVRS MVLSFPLIIL 60
61 STLDENFLSE VAQVFSSLNL LPELSRMGCT YGELCIRFTK LLKQLANKFL FFFRPDVSFP 120
121 SYFLGSLIAH EIHFLPWDFN MLCSNSVQSA HT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [259-911] |
1 11 21 31 41 51
| | | | | |
1 NLQPDITSFV AILSLSHEAY HCTENEFWNL EAQKLTENTT QKVLQLVAED ALEAWKLDIL 60
61 EDIDRCIQCC RRFLSANQRI NYSSSENNPF SFTSQDVEAL KDELSSNLCD LYLWSIDLEQ 120
121 ISPSDCLLDN YSLFVDLLVT LKVSLLRIKS IIVQFSERIV FLSLEYKFLT NIQPELNDAE 180
181 KSQLDGFDLN KTNWFDSKGL VCYLMKQTSP EPLLIRNLLF SFWSCNGKIE QDGKIKTATL 240
241 VFIINYLLRT DIDSTFFTTI FLNTYASMIS SSDLFSILGA HFRFICSLNF GKISFISHEF 300
301 YRVSKRFLDI LLIWFESYLV EELDNSKSIF FLFKIYKVFE VFVVPHFASA EELLHSLSHL 360
361 LHHPSTKRSH KMLEGKELSQ ELEDLSLHNS PDPIIYKDEL VLLLPPREIA KQLCILEFQS 420
421 FSHISRIQFL TKIWDNLNRF SPKEKTSTFY LSNHLVNFVT ETIVQEEEPR RRTNVLAYFI 480
481 QVCDYLRELN NFASLFSIIS ALNSSPIHRL RKTWANLNSK TLASFELLNN LTEARKNFSN 540
541 YRDCLENCVL PCVPFLGVYF TDLTFLKTGN KDNFQNMINF DKRTKVTRIL NEIKKFQSVG 600
601 YMFNPINEVQ ELLNEVISRE RNTNNIYQRS LTVEPRESED QALQRLLIDS GIF
|
| Detection Method: | |
| Confidence: | 139.0 |
| Match: | 1xd4A |
| Description: | Crystal structure of the DH-PH-cat module of Son of Sevenless (SOS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.34731558780557 | bayes_pls_golite062009 |
| protein binding | 1.90786769159903 | bayes_pls_golite062009 |
| Rho guanyl-nucleotide exchange factor activity | 0.885131503553978 | bayes_pls_golite062009 |
