| Protein: | spo3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1028 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for spo3.
|
Region A: Residues: [1-277] |
1 11 21 31 41 51
| | | | | |
1 MGILSVIRIF IYCLIRLFSF NSRKRNSSID ELERGEINAF ACDKQNTPSP NSECRPLTPL 60
61 NSPFRRTVEG DTANLQAPSP TACPSFDSAS SIKSSKEDIA CRKLSTERFF YSPNGIDEMK 120
121 KQQQFKKIPT VSITEVEPAF IPSNMEQALF SEEPFVIQDD LSHQINLDDN RKFSRIQKNK 180
181 LDPLITVNLV PIVNGENCFN FYETQMETNF LSPEFIKKPS MVDHKRDSEI NAVTAVSADG 240
241 SFSPLTETLS STISTLSNDS LDGLSSQKNE FTGFNSN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [278-338] |
1 11 21 31 41 51
| | | | | |
1 SEWIPNDTVD YICNSDASSV VSNLSDFEDC FDQFGVYDKE YEKKIEKTKR NFPKFQSSAT 60
61 Y
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.645 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.545 | a.4.1 | Homeodomain-like |
| View | Download | 0.540 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.540 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.539 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.535 | a.4.1 | Homeodomain-like |
| View | Download | 0.532 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.473 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.460 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.452 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.344 | a.4.1 | Homeodomain-like |
| View | Download | 0.316 | a.4.1 | Homeodomain-like |
| View | Download | 0.205 | a.4.1 | Homeodomain-like |
| View | Download | 0.200 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [339-449] |
1 11 21 31 41 51
| | | | | |
1 PPFSAHHQAR RNNPQGFRNV KKRFQLFKDD CTALTDSDFL DALPFFNARV IIALYVEWRL 60
61 RVYETMIIKG EESLKNLQRA RDGPHNKLWL GVFGNKDTIK KLSNYDRRAI S
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.782 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.782 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.718 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.713 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.713 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.700 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.700 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.686 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.686 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.630 | a.158.1 | F-box domain |
| View | Download | 0.545 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.540 | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.407 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.397 | a.278.1 | Description not found. |
|
Region A: Residues: [450-677] |
1 11 21 31 41 51
| | | | | |
1 NPYVSNHLNF NVRRVKSDTV YIPTILQLLR SSTQLMTEQA FVASSNLKST KGLRETRLIQ 60
61 KYKVKGDFEY VYAALYYAAF TQESTLKAVT IDDILSEDEL EDWWYLNLRY TSFITPQLCF 120
121 EFLDKEADSC RDRLTEVKSE PPKAVIYEEP LNKLSRFSSD RLFTSHELVA IAELISLNEP 180
181 PLESGKKFYY EEFQKACQKK RDDYRYSPEI EFKAAFREKF LQSNEKVP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [678-909] |
1 11 21 31 41 51
| | | | | |
1 FPRPGEIYEK RCDYFSKYAC QNIFISKPLK RSGSIYEVFS DGIGRVIYGS VLDYEATRNN 60
61 ILLHFGFEIH CAPSEEELIE REEAFKDFHN MLSFKYSANE IYEFCGTHSR AEVHKNEVLK 120
121 RMAYYLIDEN KEISILRRIL SLRIVEPTTS FTRYEYDLWR TFYPDVLYLN YSKSGRIPTG 180
181 SPYIMNGQWR KDLCVSTPPM VDINSALFPH WFKLSASNLF AGAEHAGLNR QK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [910-1028] |
1 11 21 31 41 51
| | | | | |
1 PDKIDLDLYE PLPENSYLVA AELRVLRALR HKNPENIPLL EKWEVRALHQ LMAKIRKYYT 60
61 VPTDYLSLRM DGLQAMLRKR EYMSCYTFNY FDYACLMDHA YRLYEGFNNQ VVNLPPRIM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.927 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.785 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.785 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.773 | a.24.22 | Description not found. |
| View | Download | 0.729 | a.24.18 | Description not found. |
| View | Download | 0.718 | a.24.18 | Description not found. |
| View | Download | 0.618 | a.46.1 | Methionine synthase domain |
| View | Download | 0.614 | a.112.1 | Description not found. |
| View | Download | 0.589 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.392 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.332 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.262 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.229 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.218 | d.110.4 | SNARE-like |
