| Protein: | sep1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 663 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sep1.
| Description | E-value | Query Range |
Subject Range |
|
|
348.0 | [0..1] | [582..1] |
|
|
171.0 | [0..106] | [378..91] |
|
|
166.0 | [0..123] | [227..1] |
|
|
164.0 | [0..1] | [369..36] |
|
|
164.0 | [0..82] | [528..177] |
|
|
164.0 | [0..40] | [323..255] |
|
|
163.0 | [0..127] | [226..2] |
|
|
162.0 | [0..113] | [373..128] |
|
|
160.0 | [0..77] | [420..122] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MNFNSTNPYY FTHEKNLNNA SKYSELPIAY QEIPLQSLPP YPKVASKLKG VVAGGKENNI 60
61 ASFQKPSSKA TRPYIPSYTR LTYSVPPLPI PPPSEQSLDT IIYRNPSV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-236] |
1 11 21 31 41 51
| | | | | |
1 SSSQSQEPEE FFLPLDDGKK PPYSYAMLIG MSIIRSPDRR LTLSAIYDWI SNTFSFYNKS 60
61 NNGWQNSIRH NLSLNKAFMK IERPRNLPGK GHFWSIRPGH EEQFLKLKLR KPGVNSRPAP 120
121 PVQDVTSS
|
| Detection Method: | |
| Confidence: | 40.09691 |
| Match: | 1d5vA |
| Description: | Adipocyte-transcription factor FREAC-11 (s12, fkh-14) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [237-402] |
1 11 21 31 41 51
| | | | | |
1 TKYGSSTGSS GFNTFNTSPH IFNQRHQYLQ NYYTASLTNI PTISNVNATN FHPLHSQQPY 60
61 VDTPGIDAPS DLEAKFSDLG VSSVVSVTSP LQSCTNSPSP PLSSPASSAS PSESLRNESL 120
121 GIKSAKSLGL NKDDAPVEGP PVSHLEKDVE TPSVHDSVLG FNDTVT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [403-523] |
1 11 21 31 41 51
| | | | | |
1 NLGKKGLKDG TTNTLQIPAV RLPSLPSSPT IKNPSGLLLK RSNSIDFPTP PKALCPKLFC 60
61 FRDDIVADDY TKFSLLSPIR SDMSGISASP NTNLKEHRTR ILQMLATPDA KQLSSLTSSD 120
121 A
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [524-663] |
1 11 21 31 41 51
| | | | | |
1 EFWSVTPLKS SILRNGDASK QVTLSESPKG DSLLDGGSLS YFTNNISSVA GLETPSKLPM 60
61 SKSFDTFEDD FLDPMDMLSF ENHFSDFNSN RKVSPVKREV RRKYISSATT IHSSAAQDDT 120
121 YLPSPTKRKM PLLRQTSTLF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.832 | 0.167 | barrier septum formation | d.14.1 | Ribosomal protein S5 domain 2-like |
