| Protein: | mrps5 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 387 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mrps5.
| Description | E-value | Query Range |
Subject Range |
|
|
271.0 | [0..178] | [370..3] |
|
|
268.0 | [0..186] | [370..47] |
|
|
268.0 | [0..186] | [370..54] |
|
|
268.0 | [0..186] | [370..60] |
|
|
268.0 | [0..183] | [370..36] |
|
Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MLRSFSHFLQ IGSRRQPTYF RCFHKTTVHL NSFKNDPKKE LNSNLNEKSV EESSKNETKE 60
61 QFNSSSIPRE SESEGKTASN TSPLSPKKVE NLSKLFNDIN EDVSIEELKS RFKDHLPFYE 120
121 NYIRNHPLAI EALQKSTAPR QTGLKLNYVS KLDKYVTPLD GYSHLGSEES NGEIPDKWED 180
181 FKDDLT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [187-387] |
1 11 21 31 41 51
| | | | | |
1 FEISSKFSPF DFGDAGKSTS DAEFLSDISG IPKSDLRALM FVPLVRRRVV NQTRKGKIAS 60
61 MYVLTVVGNR NGVAGFGEGK AESYSLAYKQ SCGRAVKNMV YIPRYDKRTV YGVIHKKFHA 120
121 VRLTLRSRPA GFGLRCNPIL HEICRCAGIK DISGEILGSK NGMNTVKAMF EALQSQRLPE 180
181 DIAMERGQKF VDVQREYYKQ T
|
| Detection Method: | |
| Confidence: | 56.0 |
| Match: | 1vs5E |
| Description: | No description for 1vs5E was found. |
| Term | Confidence | Notes |
| structural constituent of ribosome | 6.7575603459566 | bayes_pls_golite062009 |
| structural molecule activity | 6.24187874355454 | bayes_pls_golite062009 |
| RNA binding | 3.5405508156591 | bayes_pls_golite062009 |
| nucleic acid binding | 3.06806242310926 | bayes_pls_golite062009 |
| binding | 2.86619976447436 | bayes_pls_golite062009 |
| DNA binding | 1.59400162385296 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 1.56111033008721 | bayes_pls_golite062009 |
| protein binding | 1.43319050998069 | bayes_pls_golite062009 |
| transcription regulator activity | 1.36103792167395 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.35935222635763 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.31205157616894 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 1.10842504252923 | bayes_pls_golite062009 |
| double-stranded RNA binding | 0.967560318725736 | bayes_pls_golite062009 |
| mRNA binding | 0.625703291171316 | bayes_pls_golite062009 |
| transcription factor activity | 0.442070779997034 | bayes_pls_golite062009 |
| RNA helicase activity | 0.222896865667011 | bayes_pls_golite062009 |
