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View Structure Prediction Details

Protein: rst2
Organism: Schizosaccharomyces pombe
Length: 567 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rst2.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
399.0 [0..1] [374..2507]
gi|114679316 - gi|114679316|ref|XP_512926.2| PREDICTED: zinc finger protein 28 [Pan troglodytes]
355.0 [0..1] [419..471]
gi|7243243 - gi|7243243|dbj|BAA92669.1| KIAA1431 protein [Homo sapiens]
353.0 [0..1] [431..458]
gi|109125970 - gi|109125970|ref|XP_001115785.1| PREDICTED: similar to zinc finger protein 665 [Macaca mulatta]
348.0 [0..1] [401..281]

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Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRESLAPIA SKANTLSESK VSENLMSINS DSGTSNANTP SSVTSNSKPV ASSTAAKKDP  60
   61 NAPPQKVKQY VCETCTRAFA RLEHLKRHIR SHTNEKPFTC SEIDGLPTGC GRQFSRRDLL 120
  121 LRHQQKIHRN PQPRRRRRST TALPNPSLSN VSVSTTNLAS KPVISLPQAD SIDKFRYPKL 180
  181 HAALQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.30103
Match: 2i13A
Description: No description for 2i13A was found.

Predicted Domain #2
Region A:
Residues: [186-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AQLANNSGSF SASWLQAQQQ RLVSAGNGRE TVNASASGAV NPTSSQWSDQ RLGVPYGPDS  60
   61 PLYYRRATIA SDLRPSVYQH PQLYDFNRPE SLSGQLDDES LARMPYSPNA VSRNYAMNMT 120
  121 LPESIPEGYE I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.522879
Match: 2yt9A
Description: No description for 2yt9A was found.

Predicted Domain #3
Region A:
Residues: [317-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKLDWMSFSE SLNLPTFNQP SGPSDVSASF LNLQAMPSPH ASPKDSLINK SNSYFFQNPP  60
   61 KSNSVDYTRL DNLEHMRQSC ISPSGTNFSP SCYSPESLMQ QPLTLSPSSI PSGLPTYAHV 120
  121 NSPLGTEQYP SEAYPPKGYV DMEGRISEGI KEEGISLSEE IT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [479-567]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKDQAFASMG YFDSYNFEGV ENSNSLNNEG DQMETNFQSE KLDNSNSIPF FNFNSFNNNG  60
   61 ANWSSDFNYP VSETSGLLTD NNRNQPPSF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle