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View Structure Prediction Details

Protein: rec10
Organism: Schizosaccharomyces pombe
Length: 791 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rec10.

Description E-value Query
Range
Subject
Range
gi|25353259, gi|... - gi|976362|gb|AAA99538.1| Rec10p, gi|25353259|pir||T52489 Rec10 protein [validated] - fission yeast ...
1252.0 [0..151] [791..1]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIFSEFLNC LSSDGTLNES SIYKTYQILE SLNPKDVDTK ENYIKLSNTF STLGSGVGFQ  60
   61 DNLLIEMFKI LTVLFFKTRS TDLGDLLIES FTSLEIEKLM RVKKTIGSIV LTKGIQELQE 120
  121 IELPKVGFNC MTYDESIFQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [140-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GISLERLILQ LMSIFIAKCE ENKLWLVNNR KDLDLRVIGQ RLLHRDFACR FLSGLFISRF  60
   61 SVSGDTDESK HQNGIRLQLF IDFSKFETRL TMQILKADRI FSTCVANTVH AYEGLFSSGS 120
  121 NIDSTIATLV LEPRDLIVYR KGFALLQIPW TSVTTIDKIK KVKSLKIITE VSSLDEFVFQ 180
  181 CKDGDKFDEL FSTSEEIMNK LLPAIIVSPK LTLRNRSIIQ IKEGESKLP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [369-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTSKQASQNL PHLDDELAYQ RFEDQVIDKS VCDDECTNTE NTPSSNIPAD VKDSLSADDY  60
   61 AYDTKRKTQI EDLEEDQNKS KIASKDGTNL KEINSVPEFS DENVINQTG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [478-662]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAKKTPVQRR KDGKFAKSTK RKKQKSLKPD TENQESSVKN KKAKSNVNLQ YSPKTPICKI  60
   61 NDETLKPPTI ANIAGHKQMN HLTSENIETP VPVPNGNWYN GVKHETATDI FTTCHDGNNS 120
  121 LKSSVWKELL KEKHWKQESK PQLTGNSRQI DLSTFVKQAN TPNITSLLDG TCSSPPNNEC 180
  181 FNDKE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [663-791]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDSSSSTLIS DRQELEYRNP NAETVKLEEI PYNKFFKTVE KNEAYNPSSK SATIDGLQRY  60
   61 TSMIGNQIYE GILQNEKELR SKLEAYHINC NKVIKEFSKR QTARYKIIEK ELAQIEVNLV 120
  121 SQIDSLMFK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.855 a.246.1 Description not found.


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