YRC Public Data Repository - Protein Structure Prediction

Protein:	ade8
Organism:	Schizosaccharomyces pombe
Length:	482 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ade8.

Description	E-value	Query Range	Subject Range
gi\|46435040, gi\|... - gi\|68485093\|ref\|XP_713536.1\| hypothetical protein CaO19.11351 [Candida albicans SC5314], gi\|46435040... orf19.11351 - ADE13 CGDID:CAL0002147 Assembly 19, Contig19-20193 (43950, 42502) CDS, reverse complemented, transla...	429.0	[0..1]	[482..1]
gi\|49524396 - gi\|49524396\|emb\|CAG57993.1\| unnamed protein product [Candida glabrata] gi\|50285329, gi\|... - gi\|50285329\|ref\|XP_445093.1\| unnamed protein product [Candida glabrata], gi\|49524396\|emb\|CAG57993.1\|...	427.0	[0..1]	[482..1]
ARLY_NITOC - Argininosuccinate lyase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=argH PE=3 SV=1 gi\|207089381 - gi\|207089381\|gb\|EDZ66653.1\| argininosuccinate lyase [Nitrosococcus oceani AFC27] gi\|254436270, gi... - gi\|254436270\|ref\|ZP_05049777.1\| argininosuccinate lyase [Nitrosococcus oceani AFC27], gi\|224409727\|r...	420.0	[0..9]	[465..10]
gi\|50304339, gi\|... - gi\|50304339\|ref\|XP_452119.1\| unnamed protein product [Kluyveromyces lactis], gi\|49641251\|emb\|CAH0251... gi\|49641251 - gi\|49641251\|emb\|CAH02512.1\| KLLA0B13189p [Kluyveromyces lactis]	419.0	[0..1]	[482..1]
gi\|151940882 - gi\|151940882\|gb\|EDN59264.1\| adenylosuccinate lyase [Saccharomyces cerevisiae YJM789] ADE13 - Adenylosuccinate lyase, catalyzes two steps in the 'de novo' purine nucleotide biosynthetic pathway;... PUR8_YEAST - Adenylosuccinate lyase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADE13 PE=1 SV=1 gi\|190405404 - gi\|190405404\|gb\|EDV08671.1\| adenylosuccinate lyase [Saccharomyces cerevisiae RM11-1a]	418.0	[0..1]	[482..1]
gi\|49646881 - gi\|49646881\|emb\|CAG83268.1\| YALI0B17402p [Yarrowia lipolytica] gi\|50547091, gi\|... - gi\|50547091\|ref\|XP_501015.1\| YALI0B17402p [Yarrowia lipolytica], gi\|49646881\|emb\|CAG83268.1\| YALI0B1...	414.0	[0..1]	[482..1]
ARLY_PSESM - Argininosuccinate lyase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=argH PE=3 SV=1 ARLY_PSESM - Argininosuccinate lyase OS=Pseudomonas syringae pv. tomato GN=argH PE=3 SV=1	412.0	[0..1]	[468..1]
gi\|44980882, gi\|... - gi\|45185224\|ref\|NP_982941.1\| ABL006Cp [Ashbya gossypii ATCC 10895], gi\|44980882\|gb\|AAS50765.1\| ABL00... gi\|44980882 - gi\|44980882\|gb\|AAS50765.1\| ABL006Cp [Ashbya gossypii ATCC 10895]	412.0	[0..1]	[482..1]
gi\|53692620, gi\|... - gi\|53692620\|ref\|ZP_00122557.2\| COG0114: Fumarase [Haemophilus somnus 129PT], gi\|113461245\|ref\|YP_719...	412.0	[0..2]	[432..8]

Back

Predicted Domain #1

Region A:
Residues: [1-482]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDYGSYSTP LTARYASAEM SHLFSREMRI NTWRQLWLNL AIAEKQLGLT QITDEAIEQL  60
   61 KAHVKITAPE FEIAAKEEKR QRHDVMAHIY TYGLAAPAAS GIIHLGATSC FVTDNADLIF 120
  121 LRSAMDLLIP KLVNVINRLS QWSLRYKDIP TLGFTHYQPA QLTTVGKRAT LWIQELLWDL 180
  181 RNFVRARNDI GFRGVKGTTG TQASFLALFE GDHAKVEELD KLVAKLSGFD NVYPVTGQTY 240
  241 DRKIDIDVLQ PLASFGATAH KIATDIRLLA NLKEVEEPFE AGQIGSSAMA YKRNPMRCER 300
  301 ICSQARYIMN LIPNALNTAS VQWFERTLDD SSNRRSLLPE AFLFTDSVLK ILLNVISGMV 360
  361 IYPKVIQKHI RAELPFMATE NIIMAMTKHG ASRHECHEQI RVLSHQAGRV VKEEGGDNDL 420
  421 IERIKNTPYF APIYDELDSL LDASTFVGRA PEQTESFVNK DVSQALAPFK SMITEEKVDL 480
  481 AV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	115.0
Match:	2j91A
Description:	No description for 2j91A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits